RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TRAV23DV6A0A075B6W5 121 aa9.98□□□□□ -0.81
CLK3-207ENST00000562389 LINC00518Q8N0U6 118 aa9.98□□□□□ -0.81
CLK3-207ENST00000562389 CBY1Q9Y3M2 126 aa9.98□□□□□ -0.81
CLK3-207ENST00000562389 COX8AP10176 69 aa9.97□□□□□ -0.81
CLK3-207ENST00000562389 HIGD2AQ9BW72 106 aa9.97□□□□□ -0.81
CLK3-207ENST00000562389 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
CLK3-207ENST00000562389 MUSTN1Q8IVN3 82 aa9.96□□□□□ -0.82
CLK3-207ENST00000562389 B5MCH6 92 aa9.95□□□□□ -0.82
CLK3-207ENST00000562389 OR13C6PQ8NH95 151 aa9.95□□□□□ -0.82
CLK3-207ENST00000562389 DLEU1O43261 78 aa9.94□□□□□ -0.82
CLK3-207ENST00000562389 ZNF73O43830 326 aaPredicted RBP9.94□□□□□ -0.82
CLK3-207ENST00000562389 SPATA45Q537H7 98 aa9.94□□□□□ -0.82
CLK3-207ENST00000562389 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
CLK3-207ENST00000562389 PAM16Q9Y3D7 125 aa9.94□□□□□ -0.82
CLK3-207ENST00000562389 Q6ZRX8 168 aa9.93□□□□□ -0.82
CLK3-207ENST00000562389 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
CLK3-207ENST00000562389 A0A087X002 238 aa9.92□□□□□ -0.82
CLK3-207ENST00000562389 CRYGAP11844 174 aa9.92□□□□□ -0.82
CLK3-207ENST00000562389 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
CLK3-207ENST00000562389 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
CLK3-207ENST00000562389 PYY3Q5JQD4 70 aa9.9□□□□□ -0.82
CLK3-207ENST00000562389 SPRR4Q96PI1 79 aa9.9□□□□□ -0.82
CLK3-207ENST00000562389 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
CLK3-207ENST00000562389 HINT1P49773 126 aaPredicted RBP9.89□□□□□ -0.83
CLK3-207ENST00000562389 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
CLK3-207ENST00000562389 Q9BRP9 147 aa9.89□□□□□ -0.83
CLK3-207ENST00000562389 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
CLK3-207ENST00000562389 A6NDN8 102 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 SLC25A34Q6PIV7 304 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
CLK3-207ENST00000562389 A4D1N5 150 aa9.85□□□□□ -0.83
CLK3-207ENST00000562389 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
CLK3-207ENST00000562389 ELOF1P60002 83 aaKnown RBP9.84□□□□□ -0.83
CLK3-207ENST00000562389 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
CLK3-207ENST00000562389 TRBV7-6A0A0J9YX20 115 aa9.83□□□□□ -0.84
CLK3-207ENST00000562389 LINC00483Q53H64 154 aa9.83□□□□□ -0.84
CLK3-207ENST00000562389 C2orf91Q6ZV80 131 aa9.83□□□□□ -0.84
CLK3-207ENST00000562389 COX7BP24311 80 aa9.82□□□□□ -0.84
CLK3-207ENST00000562389 DHRS4-AS1Q9P1J3 65 aa9.81□□□□□ -0.84
CLK3-207ENST00000562389 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
CLK3-207ENST00000562389 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
CLK3-207ENST00000562389 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
CLK3-207ENST00000562389 SMIM11BQ8TCY0 68 aa9.79□□□□□ -0.84
CLK3-207ENST00000562389 TAL2Q16559 108 aa9.78□□□□□ -0.84
CLK3-207ENST00000562389 C12orf57Q99622 126 aa9.76□□□□□ -0.85
CLK3-207ENST00000562389 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
CLK3-207ENST00000562389 ST20-AS1Q8NBB2 130 aa9.75□□□□□ -0.85
CLK3-207ENST00000562389 CEND1Q8N111 149 aa9.74□□□□□ -0.85
CLK3-207ENST00000562389 HMCN2Q8NDA2 5059 aa9.73□□□□□ -0.85
CLK3-207ENST00000562389 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
CLK3-207ENST00000562389 CFC1P0CG37 223 aa9.73□□□□□ -0.85
CLK3-207ENST00000562389 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
CLK3-207ENST00000562389 SPRR1BP22528 89 aa9.72□□□□□ -0.85
CLK3-207ENST00000562389 CTAG1AP78358 180 aa9.72□□□□□ -0.85
CLK3-207ENST00000562389 VAMP3Q15836 100 aa9.71□□□□□ -0.86
CLK3-207ENST00000562389 NHP2Q9NX24 153 aaKnown RBP9.71□□□□□ -0.86
CLK3-207ENST00000562389 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.86
CLK3-207ENST00000562389 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
CLK3-207ENST00000562389 A6NJY4 79 aa9.7□□□□□ -0.86
CLK3-207ENST00000562389 TSPAN13O95857 204 aa9.7□□□□□ -0.86
CLK3-207ENST00000562389 RAB37Q96AX2 223 aa9.7□□□□□ -0.86
CLK3-207ENST00000562389 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
CLK3-207ENST00000562389 HSD52Q0P140 79 aa9.69□□□□□ -0.86
CLK3-207ENST00000562389 MOBPQ13875 183 aa9.69□□□□□ -0.86
CLK3-207ENST00000562389 FXYD2P54710 66 aa9.68□□□□□ -0.86
CLK3-207ENST00000562389 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
CLK3-207ENST00000562389 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
CLK3-207ENST00000562389 Q8NBF4 154 aa9.68□□□□□ -0.86
CLK3-207ENST00000562389 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
CLK3-207ENST00000562389 SLC25A20O43772 301 aa9.66□□□□□ -0.86
CLK3-207ENST00000562389 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
CLK3-207ENST00000562389 IGLV5-48A0A075B6I7 105 aa9.65□□□□□ -0.86
CLK3-207ENST00000562389 TEX49A0A1B0GTD5 131 aa9.65□□□□□ -0.86
CLK3-207ENST00000562389 H7C2G1 150 aa9.65□□□□□ -0.86
CLK3-207ENST00000562389 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
CLK3-207ENST00000562389 C9orf153Q5TBE3 101 aa9.65□□□□□ -0.86
CLK3-207ENST00000562389 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
CLK3-207ENST00000562389 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
CLK3-207ENST00000562389 DEFB105AQ8NG35 78 aa9.64□□□□□ -0.87
CLK3-207ENST00000562389 LAMTOR3Q9UHA4 124 aa9.64□□□□□ -0.87
CLK3-207ENST00000562389 PRO1854Q9UHT4 67 aa9.63□□□□□ -0.87
CLK3-207ENST00000562389 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
CLK3-207ENST00000562389 SPINK1P00995 79 aa9.61□□□□□ -0.87
CLK3-207ENST00000562389 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
CLK3-207ENST00000562389 PRR4Q16378 134 aa9.6□□□□□ -0.87
CLK3-207ENST00000562389 Q1RN00 199 aa9.6□□□□□ -0.87
CLK3-207ENST00000562389 SMIM29Q86T20 159 aa9.6□□□□□ -0.87
CLK3-207ENST00000562389 Q8N377 158 aa9.59□□□□□ -0.87
CLK3-207ENST00000562389 PRO1933Q9H354 126 aa9.59□□□□□ -0.87
CLK3-207ENST00000562389 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
CLK3-207ENST00000562389 H0YGX0 51 aa9.58□□□□□ -0.88
CLK3-207ENST00000562389 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
CLK3-207ENST00000562389 Q6ZQY7 126 aa9.58□□□□□ -0.88
CLK3-207ENST00000562389 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
CLK3-207ENST00000562389 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
CLK3-207ENST00000562389 K7ERJ3 54 aa9.55□□□□□ -0.88
CLK3-207ENST00000562389 TRIAP1O43715 76 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms