RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 UBE2AP49459 152 aa4.91□□□□□ -1.62
GINS3-204ENST00000561952 COL5A1-AS1Q5SY13 56 aa4.91□□□□□ -1.62
GINS3-204ENST00000561952 ANAPC11Q9NYG5 84 aa4.91□□□□□ -1.62
GINS3-204ENST00000561952 TP73-AS1Q9UF72 201 aa4.91□□□□□ -1.62
GINS3-204ENST00000561952 A0A087X002 238 aa4.9□□□□□ -1.63
GINS3-204ENST00000561952 HINT1P49773 126 aaPredicted RBP4.9□□□□□ -1.63
GINS3-204ENST00000561952 HSD52Q0P140 79 aa4.9□□□□□ -1.63
GINS3-204ENST00000561952 BVES-AS1Q5T3Y7 98 aa4.9□□□□□ -1.63
GINS3-204ENST00000561952 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
GINS3-204ENST00000561952 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 A0A1B0GV90 55 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 TMEM223A0PJW6 202 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 HERVK_113P61574 105 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 PRLHP81277 87 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 TAL2Q16559 108 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 ERG28Q9UKR5 140 aa4.89□□□□□ -1.63
GINS3-204ENST00000561952 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 IGLV5-39A0A0G2JS06 123 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 TMEM238C9JI98 176 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
GINS3-204ENST00000561952 LEPROTO15243 131 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 CRYGAP11844 174 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 VPREB1P12018 145 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 BATFQ16520 125 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 FAM19A1Q7Z5A9 133 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
GINS3-204ENST00000561952 Q8NDZ9 215 aa4.86□□□□□ -1.63
GINS3-204ENST00000561952 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
GINS3-204ENST00000561952 A6NDN8 102 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 ZNF815PA8K554 130 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 J3QQQ9 107 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 LINC00158P58513 81 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 TSPEAR-AS2P59090 65 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 TMEM126AQ9H061 195 aa4.85□□□□□ -1.63
GINS3-204ENST00000561952 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
GINS3-204ENST00000561952 TAX1BP3O14907 124 aa4.84□□□□□ -1.63
GINS3-204ENST00000561952 RPL24P83731 157 aaKnown RBP4.84□□□□□ -1.63
GINS3-204ENST00000561952 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.63
GINS3-204ENST00000561952 MEIG1Q5JSS6 88 aa4.84□□□□□ -1.63
GINS3-204ENST00000561952 CEND1Q8N111 149 aa4.84□□□□□ -1.63
GINS3-204ENST00000561952 TMEM238LA0A1B0GVL6 79 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 A0A1B0GWB2 263 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 H3BS24 57 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 M0R378 163 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 NCR3O14931 201 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 SMIM13P0DJ93 91 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 LGALS3P17931 250 aaKnown RBP4.83□□□□□ -1.64
GINS3-204ENST00000561952 FXYD2P54710 66 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 COX17Q14061 63 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
GINS3-204ENST00000561952 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
GINS3-204ENST00000561952 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
GINS3-204ENST00000561952 TIMM17BO60830 172 aa4.81□□□□□ -1.64
GINS3-204ENST00000561952 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
GINS3-204ENST00000561952 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
GINS3-204ENST00000561952 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
GINS3-204ENST00000561952 MUC2Q02817 5179 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 Q6ZVH6 145 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 LITAFQ99732 161 aa4.8□□□□□ -1.64
GINS3-204ENST00000561952 DAND5Q8N907 189 aa4.79□□□□□ -1.64
GINS3-204ENST00000561952 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
GINS3-204ENST00000561952 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
GINS3-204ENST00000561952 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
GINS3-204ENST00000561952 NDUFA12Q9UI09 145 aa4.79□□□□□ -1.64
GINS3-204ENST00000561952 UBE2V1Q13404 147 aa4.78□□□□□ -1.64
GINS3-204ENST00000561952 NHP2Q9NX24 153 aaKnown RBP4.78□□□□□ -1.64
GINS3-204ENST00000561952 TRBV10-3A0A0K0K1G6 114 aa4.77□□□□□ -1.65
GINS3-204ENST00000561952 ETDCA0A1B0GVM5 59 aa4.77□□□□□ -1.65
GINS3-204ENST00000561952 PRYO14603 147 aa4.77□□□□□ -1.65
GINS3-204ENST00000561952 HERV-K104P63124 156 aa4.77□□□□□ -1.65
GINS3-204ENST00000561952 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
GINS3-204ENST00000561952 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
GINS3-204ENST00000561952 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
GINS3-204ENST00000561952 IFITM1P13164 125 aa4.76□□□□□ -1.65
GINS3-204ENST00000561952 NPC2P61916 151 aa4.76□□□□□ -1.65
GINS3-204ENST00000561952 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
GINS3-204ENST00000561952 IGLV7-46A0A075B6I9 117 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 H3BUT2 72 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 K7ERJ3 54 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 CFC1P0CG37 223 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 VAMP3Q15836 100 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 SMCR5Q8TEV8 140 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 RAB37Q96AX2 223 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 CDIP1Q9H305 208 aa4.75□□□□□ -1.65
GINS3-204ENST00000561952 ZNF706Q9Y5V0 76 aaPredicted RBP4.75□□□□□ -1.65
GINS3-204ENST00000561952 A4D1N5 150 aa4.74□□□□□ -1.65
GINS3-204ENST00000561952 K7EP34 96 aa4.74□□□□□ -1.65
GINS3-204ENST00000561952 GAGE2AQ6NT46 116 aa4.74□□□□□ -1.65
GINS3-204ENST00000561952 FABP2P12104 132 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms