RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CAMK2N2Q96S95 79 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 HECTD4Q9Y4D8 3996 aa4.25□□□□□ -1.73
CAPN3-210ENST00000561817 IGLV9-49A0A0B4J1Y8 123 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 LCE6AA0A183 80 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 PSMB2P49721 201 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
CAPN3-210ENST00000561817 SYCNQ0VAF6 134 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
CAPN3-210ENST00000561817 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 NDUFC2-KCTD14E9PQ53 114 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 LST1O00453 97 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 Q1RN00 199 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 Q6ZRP5 223 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 MRPL55Q7Z7F7 128 aaKnown RBP4.23□□□□□ -1.73
CAPN3-210ENST00000561817 SMIM11BQ8TCY0 68 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
CAPN3-210ENST00000561817 TRBV10-2A0A0K0K1G8 114 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 F8W1H4 67 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 M0R2N4 97 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 SCGB1C2P0DMR2 95 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 C9orf129Q5T035 196 aaKnown RBP4.22□□□□□ -1.73
CAPN3-210ENST00000561817 Q6ZR54 194 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 CARD19Q96LW7 228 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 HYDINQ4G0P3 5121 aa4.22□□□□□ -1.73
CAPN3-210ENST00000561817 RYR2Q92736 4967 aa4.21□□□□□ -1.73
CAPN3-210ENST00000561817 LECT2O14960 151 aa4.21□□□□□ -1.74
CAPN3-210ENST00000561817 CNBPP62633 177 aaKnown RBP4.21□□□□□ -1.74
CAPN3-210ENST00000561817 ATXN8Q156A1 80 aa4.21□□□□□ -1.74
CAPN3-210ENST00000561817 TTC32Q5I0X7 151 aa4.21□□□□□ -1.74
CAPN3-210ENST00000561817 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
CAPN3-210ENST00000561817 SACSQ9NZJ4 4579 aa4.21□□□□□ -1.74
CAPN3-210ENST00000561817 DNAH8Q96JB1 4490 aa4.2□□□□□ -1.74
CAPN3-210ENST00000561817 NCR3O14931 201 aa4.2□□□□□ -1.74
CAPN3-210ENST00000561817 COX6CP09669 75 aa4.2□□□□□ -1.74
CAPN3-210ENST00000561817 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
CAPN3-210ENST00000561817 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
CAPN3-210ENST00000561817 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
CAPN3-210ENST00000561817 KMT2CQ8NEZ4 4911 aaKnown RBP4.19□□□□□ -1.74
CAPN3-210ENST00000561817 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
CAPN3-210ENST00000561817 C9JAW5 83 aa4.19□□□□□ -1.74
CAPN3-210ENST00000561817 TRACP01848 142 aa4.19□□□□□ -1.74
CAPN3-210ENST00000561817 PKIGQ9Y2B9 76 aa4.19□□□□□ -1.74
CAPN3-210ENST00000561817 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 A0A087WYN8 130 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 H0YGX0 51 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 M0R378 163 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 SLC25A20O43772 301 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 ETDBQ3ZM63 59 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 OCIAD2Q56VL3 154 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 RYR3Q15413 4870 aa4.18□□□□□ -1.74
CAPN3-210ENST00000561817 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
CAPN3-210ENST00000561817 K7ERU9 68 aa4.17□□□□□ -1.74
CAPN3-210ENST00000561817 ANKRD29Q8N6D5 301 aa4.17□□□□□ -1.74
CAPN3-210ENST00000561817 FAM236DA0A1B0GTK5 79 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 FAM168BA1KXE4 195 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 H3BT86 120 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 PSCAO43653 123 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 FAM236CP0DP71 79 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
CAPN3-210ENST00000561817 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 C14orf177Q52M58 125 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 C7orf33Q8WU49 177 aa4.16□□□□□ -1.74
CAPN3-210ENST00000561817 TRAV23DV6A0A075B6W5 121 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 A0A087WTM6 91 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 A0A096LNI7 61 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 A0A1B0GX51 115 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 LINC00575Q6W349 94 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 C9orf163Q8N9P6 203 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.75
CAPN3-210ENST00000561817 PKD1P98161 4303 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 C16orf90A8MZG2 172 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 EPM2AB3EWF7 344 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
CAPN3-210ENST00000561817 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 Q8N814 137 aa4.14□□□□□ -1.75
CAPN3-210ENST00000561817 IGLV1-50A0A075B6I6 118 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-210ENST00000561817 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 A0A1W2PNN7 141 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 J3KT08 172 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 ZNF73O43830 326 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-210ENST00000561817 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 SPRR1AP35321 89 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 ELOF1P60002 83 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms