RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
TPM1-232ENST00000561425 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
TPM1-232ENST00000561425 SPANXDQ9BXN6 97 aa12.11□□□□□ -0.47
TPM1-232ENST00000561425 SPANXCQ9NY87 97 aa12.11□□□□□ -0.47
TPM1-232ENST00000561425 NCR3O14931 201 aa12.1□□□□□ -0.47
TPM1-232ENST00000561425 UQCR10Q9UDW1 63 aa12.1□□□□□ -0.47
TPM1-232ENST00000561425 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
TPM1-232ENST00000561425 NPC2P61916 151 aa12.08□□□□□ -0.48
TPM1-232ENST00000561425 Q6ZVH6 145 aa12.08□□□□□ -0.48
TPM1-232ENST00000561425 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
TPM1-232ENST00000561425 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
TPM1-232ENST00000561425 PRO1933Q9H354 126 aa12.08□□□□□ -0.48
TPM1-232ENST00000561425 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
TPM1-232ENST00000561425 TRBV10-3A0A0K0K1G6 114 aa12.07□□□□□ -0.48
TPM1-232ENST00000561425 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
TPM1-232ENST00000561425 LPAP08519 4548 aa12.06□□□□□ -0.48
TPM1-232ENST00000561425 NDUFC2O95298 119 aa12.06□□□□□ -0.48
TPM1-232ENST00000561425 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
TPM1-232ENST00000561425 IFITM1P13164 125 aa12.05□□□□□ -0.48
TPM1-232ENST00000561425 C2orf91Q6ZV80 131 aa12.05□□□□□ -0.48
TPM1-232ENST00000561425 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
TPM1-232ENST00000561425 TSTD3H0UI37 97 aa12.04□□□□□ -0.48
TPM1-232ENST00000561425 SOSTDC1Q6X4U4 206 aa12.04□□□□□ -0.48
TPM1-232ENST00000561425 SPRR4Q96PI1 79 aa12.04□□□□□ -0.48
TPM1-232ENST00000561425 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
TPM1-232ENST00000561425 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
TPM1-232ENST00000561425 CTAG1AP78358 180 aa12.03□□□□□ -0.48
TPM1-232ENST00000561425 TSPAN13O95857 204 aa12.02□□□□□ -0.49
TPM1-232ENST00000561425 IGLV6-57P01721 117 aa12.01□□□□□ -0.49
TPM1-232ENST00000561425 MUSTN1Q8IVN3 82 aa12.01□□□□□ -0.49
TPM1-232ENST00000561425 B5MCH6 92 aa12□□□□□ -0.49
TPM1-232ENST00000561425 DDTP30046 118 aa12□□□□□ -0.49
TPM1-232ENST00000561425 SMCR5Q8TEV8 140 aa12□□□□□ -0.49
TPM1-232ENST00000561425 PPDPFQ9H3Y8 114 aa12□□□□□ -0.49
TPM1-232ENST00000561425 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
TPM1-232ENST00000561425 PRR4Q16378 134 aa11.98□□□□□ -0.49
TPM1-232ENST00000561425 TAL2Q16559 108 aa11.98□□□□□ -0.49
TPM1-232ENST00000561425 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
TPM1-232ENST00000561425 ZNF706Q9Y5V0 76 aaPredicted RBP11.98□□□□□ -0.49
TPM1-232ENST00000561425 HSD52Q0P140 79 aa11.97□□□□□ -0.49
TPM1-232ENST00000561425 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
TPM1-232ENST00000561425 LINC00483Q53H64 154 aa11.95□□□□□ -0.5
TPM1-232ENST00000561425 RNF213Q63HN8 5207 aa11.93□□□□□ -0.5
TPM1-232ENST00000561425 Q6ZRX8 168 aa11.93□□□□□ -0.5
TPM1-232ENST00000561425 CEND1Q8N111 149 aa11.93□□□□□ -0.5
TPM1-232ENST00000561425 Q9BRP9 147 aa11.93□□□□□ -0.5
TPM1-232ENST00000561425 A4D1N5 150 aa11.92□□□□□ -0.5
TPM1-232ENST00000561425 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
TPM1-232ENST00000561425 S100A7L2Q5SY68 101 aa11.92□□□□□ -0.5
TPM1-232ENST00000561425 TRAV23DV6A0A075B6W5 121 aa11.9□□□□□ -0.5
TPM1-232ENST00000561425 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
TPM1-232ENST00000561425 A6NJY4 79 aa11.9□□□□□ -0.5
TPM1-232ENST00000561425 SPAG11AQ6PDA7 123 aa11.89□□□□□ -0.51
TPM1-232ENST00000561425 OR13C6PQ8NH95 151 aa11.88□□□□□ -0.51
TPM1-232ENST00000561425 ZNF73O43830 326 aaPredicted RBP11.87□□□□□ -0.51
TPM1-232ENST00000561425 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
TPM1-232ENST00000561425 FXYD2P54710 66 aa11.86□□□□□ -0.51
TPM1-232ENST00000561425 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
TPM1-232ENST00000561425 A6NDN8 102 aa11.84□□□□□ -0.51
TPM1-232ENST00000561425 M0R143 59 aa11.84□□□□□ -0.51
TPM1-232ENST00000561425 GAGE2AQ6NT46 116 aa11.84□□□□□ -0.51
TPM1-232ENST00000561425 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
TPM1-232ENST00000561425 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
TPM1-232ENST00000561425 Q8NBF4 154 aa11.82□□□□□ -0.52
TPM1-232ENST00000561425 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
TPM1-232ENST00000561425 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
TPM1-232ENST00000561425 CFC1P0CG37 223 aa11.81□□□□□ -0.52
TPM1-232ENST00000561425 HINT1P49773 126 aaPredicted RBP11.81□□□□□ -0.52
TPM1-232ENST00000561425 BVES-AS1Q5T3Y7 98 aa11.81□□□□□ -0.52
TPM1-232ENST00000561425 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
TPM1-232ENST00000561425 NHP2Q9NX24 153 aaKnown RBP11.8□□□□□ -0.52
TPM1-232ENST00000561425 TPRXLQ17RH7 258 aa11.78□□□□□ -0.52
TPM1-232ENST00000561425 SPINK1P00995 79 aa11.77□□□□□ -0.53
TPM1-232ENST00000561425 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
TPM1-232ENST00000561425 IGLV7-46A0A075B6I9 117 aa11.76□□□□□ -0.53
TPM1-232ENST00000561425 PCP4L1A6NKN8 68 aa11.76□□□□□ -0.53
TPM1-232ENST00000561425 H7C2G1 150 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 K7ERJ3 54 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 SPRR1BP22528 89 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 RPS29P62273 56 aaKnown RBP11.74□□□□□ -0.53
TPM1-232ENST00000561425 MOBPQ13875 183 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 BATFQ16520 125 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 ST20-AS1Q8NBB2 130 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
TPM1-232ENST00000561425 A0A1B0GWB2 263 aa11.73□□□□□ -0.53
TPM1-232ENST00000561425 ELOF1P60002 83 aaKnown RBP11.73□□□□□ -0.53
TPM1-232ENST00000561425 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
TPM1-232ENST00000561425 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
TPM1-232ENST00000561425 IGLV9-49A0A0B4J1Y8 123 aa11.72□□□□□ -0.53
TPM1-232ENST00000561425 Q1RN00 199 aa11.72□□□□□ -0.53
TPM1-232ENST00000561425 SMIM11BQ8TCY0 68 aa11.72□□□□□ -0.53
TPM1-232ENST00000561425 TRBV7-6A0A0J9YX20 115 aa11.71□□□□□ -0.53
TPM1-232ENST00000561425 C6orf99Q4VX62 202 aa11.71□□□□□ -0.53
TPM1-232ENST00000561425 COX7BP24311 80 aa11.69□□□□□ -0.54
TPM1-232ENST00000561425 Q8N377 158 aa11.66□□□□□ -0.54
TPM1-232ENST00000561425 VAMP3Q15836 100 aa11.65□□□□□ -0.54
TPM1-232ENST00000561425 MUC2Q02817 5179 aa11.65□□□□□ -0.55
TPM1-232ENST00000561425 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
TPM1-232ENST00000561425 MUC17Q685J3 4493 aa11.62□□□□□ -0.55
TPM1-232ENST00000561425 PSMB2P49721 201 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms