RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TYMSOSQ8TAI1 123 aa11.77□□□□□ -0.53
TSPAN3-210ENST00000561277 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
TSPAN3-210ENST00000561277 B5MCH6 92 aa11.75□□□□□ -0.53
TSPAN3-210ENST00000561277 FAM229BQ4G0N7 80 aa11.75□□□□□ -0.53
TSPAN3-210ENST00000561277 KRTAP13-2Q52LG2 175 aa11.75□□□□□ -0.53
TSPAN3-210ENST00000561277 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
TSPAN3-210ENST00000561277 ZNF73O43830 326 aaPredicted RBP11.73□□□□□ -0.53
TSPAN3-210ENST00000561277 SPRR4Q96PI1 79 aa11.73□□□□□ -0.53
TSPAN3-210ENST00000561277 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
TSPAN3-210ENST00000561277 Q6ZRX8 168 aa11.72□□□□□ -0.53
TSPAN3-210ENST00000561277 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
TSPAN3-210ENST00000561277 IFITM1P13164 125 aa11.71□□□□□ -0.53
TSPAN3-210ENST00000561277 Q6ZVH6 145 aa11.71□□□□□ -0.53
TSPAN3-210ENST00000561277 MUSTN1Q8IVN3 82 aa11.71□□□□□ -0.54
TSPAN3-210ENST00000561277 LINC00518Q8N0U6 118 aa11.71□□□□□ -0.54
TSPAN3-210ENST00000561277 CBY1Q9Y3M2 126 aa11.71□□□□□ -0.54
TSPAN3-210ENST00000561277 Q9BRP9 147 aa11.7□□□□□ -0.54
TSPAN3-210ENST00000561277 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
TSPAN3-210ENST00000561277 PPDPFQ9H3Y8 114 aa11.69□□□□□ -0.54
TSPAN3-210ENST00000561277 TSPAN13O95857 204 aa11.67□□□□□ -0.54
TSPAN3-210ENST00000561277 JOSD1Q15040 202 aaPredicted RBP11.67□□□□□ -0.54
TSPAN3-210ENST00000561277 C3orf22Q8N5N4 141 aa11.67□□□□□ -0.54
TSPAN3-210ENST00000561277 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
TSPAN3-210ENST00000561277 GAGE2AQ6NT46 116 aa11.65□□□□□ -0.54
TSPAN3-210ENST00000561277 A6NDN8 102 aa11.64□□□□□ -0.55
TSPAN3-210ENST00000561277 C6orf99Q4VX62 202 aa11.62□□□□□ -0.55
TSPAN3-210ENST00000561277 LINC00304Q8N9R0 145 aa11.62□□□□□ -0.55
TSPAN3-210ENST00000561277 LRP2P98164 4655 aa11.62□□□□□ -0.55
TSPAN3-210ENST00000561277 UBR4Q5T4S7 5183 aa11.62□□□□□ -0.55
TSPAN3-210ENST00000561277 TMA7Q9Y2S6 64 aaKnown RBP11.62□□□□□ -0.55
TSPAN3-210ENST00000561277 COX8AP10176 69 aa11.61□□□□□ -0.55
TSPAN3-210ENST00000561277 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
TSPAN3-210ENST00000561277 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
TSPAN3-210ENST00000561277 COX7BP24311 80 aa11.58□□□□□ -0.55
TSPAN3-210ENST00000561277 SPATA45Q537H7 98 aa11.58□□□□□ -0.55
TSPAN3-210ENST00000561277 ST20-AS1Q8NBB2 130 aa11.58□□□□□ -0.55
TSPAN3-210ENST00000561277 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
TSPAN3-210ENST00000561277 VAMP8Q9BV40 100 aa11.58□□□□□ -0.56
TSPAN3-210ENST00000561277 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
TSPAN3-210ENST00000561277 PRR4Q16378 134 aa11.57□□□□□ -0.56
TSPAN3-210ENST00000561277 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
TSPAN3-210ENST00000561277 IGLV9-49A0A0B4J1Y8 123 aa11.56□□□□□ -0.56
TSPAN3-210ENST00000561277 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
TSPAN3-210ENST00000561277 A4D1N5 150 aa11.55□□□□□ -0.56
TSPAN3-210ENST00000561277 HIST1H4GQ99525 98 aa11.55□□□□□ -0.56
TSPAN3-210ENST00000561277 DLEU1O43261 78 aa11.54□□□□□ -0.56
TSPAN3-210ENST00000561277 MOBPQ13875 183 aa11.54□□□□□ -0.56
TSPAN3-210ENST00000561277 Q8NBF4 154 aa11.54□□□□□ -0.56
TSPAN3-210ENST00000561277 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.57
TSPAN3-210ENST00000561277 LPAP08519 4548 aa11.52□□□□□ -0.57
TSPAN3-210ENST00000561277 C12orf57Q99622 126 aa11.51□□□□□ -0.57
TSPAN3-210ENST00000561277 TRBV7-6A0A0J9YX20 115 aa11.5□□□□□ -0.57
TSPAN3-210ENST00000561277 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
TSPAN3-210ENST00000561277 C4orf48Q5BLP8 95 aa11.5□□□□□ -0.57
TSPAN3-210ENST00000561277 SLC25A34Q6PIV7 304 aa11.5□□□□□ -0.57
TSPAN3-210ENST00000561277 RETNLBQ9BQ08 111 aa11.5□□□□□ -0.57
TSPAN3-210ENST00000561277 PYY3Q5JQD4 70 aa11.49□□□□□ -0.57
TSPAN3-210ENST00000561277 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
TSPAN3-210ENST00000561277 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
TSPAN3-210ENST00000561277 C2orf91Q6ZV80 131 aa11.45□□□□□ -0.58
TSPAN3-210ENST00000561277 DEFB105AQ8NG35 78 aa11.45□□□□□ -0.58
TSPAN3-210ENST00000561277 SSBP3-AS1Q7Z2R9 100 aa11.45□□□□□ -0.58
TSPAN3-210ENST00000561277 HIGD1BQ9P298 99 aa11.45□□□□□ -0.58
TSPAN3-210ENST00000561277 SPRR1BP22528 89 aa11.44□□□□□ -0.58
TSPAN3-210ENST00000561277 TAL2Q16559 108 aa11.44□□□□□ -0.58
TSPAN3-210ENST00000561277 CTAG1AP78358 180 aa11.43□□□□□ -0.58
TSPAN3-210ENST00000561277 VAMP3Q15836 100 aa11.41□□□□□ -0.58
TSPAN3-210ENST00000561277 SPINK1P00995 79 aa11.41□□□□□ -0.58
TSPAN3-210ENST00000561277 NHP2Q9NX24 153 aaKnown RBP11.41□□□□□ -0.58
TSPAN3-210ENST00000561277 Q1RN00 199 aa11.4□□□□□ -0.58
TSPAN3-210ENST00000561277 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
TSPAN3-210ENST00000561277 TEX49A0A1B0GTD5 131 aa11.39□□□□□ -0.59
TSPAN3-210ENST00000561277 H7C2G1 150 aa11.38□□□□□ -0.59
TSPAN3-210ENST00000561277 SLC25A20O43772 301 aa11.38□□□□□ -0.59
TSPAN3-210ENST00000561277 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
TSPAN3-210ENST00000561277 CFC1P0CG37 223 aa11.38□□□□□ -0.59
TSPAN3-210ENST00000561277 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
TSPAN3-210ENST00000561277 LINC01547P58512 204 aaPredicted RBP11.36□□□□□ -0.59
TSPAN3-210ENST00000561277 IGLV5-48A0A075B6I7 105 aa11.35□□□□□ -0.59
TSPAN3-210ENST00000561277 LINC00575Q6W349 94 aa11.35□□□□□ -0.59
TSPAN3-210ENST00000561277 CEND1Q8N111 149 aa11.35□□□□□ -0.59
TSPAN3-210ENST00000561277 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 A0A0B4J2C4 111 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 RNF213Q63HN8 5207 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 hADV29S1A0JD25 119 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
TSPAN3-210ENST00000561277 TMEM238LA0A1B0GVL6 79 aa11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 A6NJY4 79 aa11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 FXYD2P54710 66 aa11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 Q8N377 158 aa11.31□□□□□ -0.6
TSPAN3-210ENST00000561277 Q6ZQY7 126 aa11.3□□□□□ -0.6
TSPAN3-210ENST00000561277 HSD52Q0P140 79 aa11.28□□□□□ -0.6
TSPAN3-210ENST00000561277 FP248Q71RG6 208 aaPredicted RBP11.27□□□□□ -0.61
TSPAN3-210ENST00000561277 PRO1933Q9H354 126 aa11.27□□□□□ -0.61
TSPAN3-210ENST00000561277 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.61
TSPAN3-210ENST00000561277 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
TSPAN3-210ENST00000561277 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms