RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CRPP02741 224 aa4.49□□□□□ -1.69
SPG11-224ENST00000561268 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
SPG11-224ENST00000561268 COX6A2Q02221 97 aa4.49□□□□□ -1.69
SPG11-224ENST00000561268 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
SPG11-224ENST00000561268 RMI2Q96E14 147 aa4.49□□□□□ -1.69
SPG11-224ENST00000561268 H7C2G1 150 aa4.48□□□□□ -1.69
SPG11-224ENST00000561268 ENHOQ6UWT2 76 aa4.48□□□□□ -1.69
SPG11-224ENST00000561268 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
SPG11-224ENST00000561268 KLK12Q9UKR0 248 aa4.48□□□□□ -1.69
SPG11-224ENST00000561268 HAMPP81172 84 aa4.47□□□□□ -1.69
SPG11-224ENST00000561268 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
SPG11-224ENST00000561268 Q8IZM0 81 aa4.47□□□□□ -1.69
SPG11-224ENST00000561268 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 TRAV13-1A0A0B4J241 112 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 LECT2O14960 151 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 RNASE13Q5GAN3 156 aaKnown RBP4.46□□□□□ -1.7
SPG11-224ENST00000561268 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 LINC00167Q96N53 147 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 TMEM126AQ9H061 195 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 SND1-IT1Q9HBX3 110 aa4.46□□□□□ -1.7
SPG11-224ENST00000561268 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 SRRM2Q9UQ35 2752 aaKnown RBP4.45□□□□□ -1.7
SPG11-224ENST00000561268 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.45□□□□□ -1.7
SPG11-224ENST00000561268 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 DNAL4O96015 105 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
SPG11-224ENST00000561268 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 MALP21145 153 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 SS18Q15532 418 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 S100A7L2Q5SY68 101 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 C5orf38Q86SI9 138 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 DEFB104AQ8WTQ1 72 aa4.45□□□□□ -1.7
SPG11-224ENST00000561268 IGKV2-28A0A075B6P5 120 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 IGKV2D-28P01615 120 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 ANGP03950 147 aaKnown RBP4.44□□□□□ -1.7
SPG11-224ENST00000561268 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 CHCHD5Q9BSY4 110 aa4.44□□□□□ -1.7
SPG11-224ENST00000561268 UQCRQO14949 82 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 CNBPP62633 177 aaKnown RBP4.43□□□□□ -1.7
SPG11-224ENST00000561268 HIST1H4AP62805 103 aaKnown RBP4.43□□□□□ -1.7
SPG11-224ENST00000561268 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 C9orf163Q8N9P6 203 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 C22orf24Q9Y442 160 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 HERC1Q15751 4861 aa4.43□□□□□ -1.7
SPG11-224ENST00000561268 IGLV4-60A0A075B6I1 120 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 GVQW2A0A096LPI5 108 aaPredicted RBP4.42□□□□□ -1.7
SPG11-224ENST00000561268 TRBV10-3A0A0K0K1G6 114 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
SPG11-224ENST00000561268 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 BCE1O60756 84 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 PLA2G1BP04054 148 aaKnown RBP4.42□□□□□ -1.7
SPG11-224ENST00000561268 REG3AQ06141 175 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 Q6JHZ5 121 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 CIRBP-AS1Q8TBR5 109 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 SMIM11BQ8TCY0 68 aa4.42□□□□□ -1.7
SPG11-224ENST00000561268 ATOX1O00244 68 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 PDE6GP18545 87 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 LINC00158P58513 81 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 C6orf226Q5I0X4 101 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 CLPSL2Q6UWE3 100 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 ORMDL1Q9P0S3 153 aa4.41□□□□□ -1.7
SPG11-224ENST00000561268 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.7
SPG11-224ENST00000561268 TRBV7-6A0A0J9YX20 115 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 PANO1I0J062 215 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 NPC2P61916 151 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 C15orf56Q8N910 161 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.71
SPG11-224ENST00000561268 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
SPG11-224ENST00000561268 SLPIP03973 132 aa4.39□□□□□ -1.71
SPG11-224ENST00000561268 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
SPG11-224ENST00000561268 IGLV10-54A0A075B6I4 117 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 CCKP06307 115 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 CRYGAP11844 174 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 SEC61GP60059 68 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 SPACA4Q8TDM5 124 aa4.38□□□□□ -1.71
SPG11-224ENST00000561268 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 OXTP01178 125 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 COX7CP15954 63 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 TOMM7Q9P0U1 55 aa4.37□□□□□ -1.71
SPG11-224ENST00000561268 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
SPG11-224ENST00000561268 A0A087WYN8 130 aa4.36□□□□□ -1.71
SPG11-224ENST00000561268 A0A1B0GW54 56 aa4.36□□□□□ -1.71
SPG11-224ENST00000561268 B5MCH6 92 aa4.36□□□□□ -1.71
SPG11-224ENST00000561268 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
SPG11-224ENST00000561268 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
SPG11-224ENST00000561268 GAGE2AQ6NT46 116 aa4.36□□□□□ -1.71
SPG11-224ENST00000561268 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms