RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SPTAN1Q13813 2472 aaKnown RBP-1.88□□□□□ -2.71
PSMA4-221ENST00000560842 KIAA1551Q9HCM1 1747 aa-1.88□□□□□ -2.71
PSMA4-221ENST00000560842 TRBV7-7A0A0K0K1E9 115 aa-1.89□□□□□ -2.71
PSMA4-221ENST00000560842 MT1EP04732 61 aa-1.89□□□□□ -2.71
PSMA4-221ENST00000560842 C1orf54Q8WWF1 131 aa-1.89□□□□□ -2.71
PSMA4-221ENST00000560842 CGREF1Q99674 301 aa-1.89□□□□□ -2.71
PSMA4-221ENST00000560842 TMEM262E9PQX1 116 aa-1.9□□□□□ -2.71
PSMA4-221ENST00000560842 NDUFA2O43678 99 aa-1.9□□□□□ -2.71
PSMA4-221ENST00000560842 SMR3BP02814 79 aaPredicted RBP-1.9□□□□□ -2.71
PSMA4-221ENST00000560842 HSD52Q0P140 79 aa-1.9□□□□□ -2.71
PSMA4-221ENST00000560842 CRYM-AS1A6NIL9 109 aa-1.91□□□□□ -2.72
PSMA4-221ENST00000560842 KRTDAPP60985 99 aa-1.91□□□□□ -2.72
PSMA4-221ENST00000560842 NMSQ5H8A3 153 aa-1.91□□□□□ -2.72
PSMA4-221ENST00000560842 PSENENQ9NZ42 101 aa-1.91□□□□□ -2.72
PSMA4-221ENST00000560842 ATMQ13315 3056 aa-1.91□□□□□ -2.72
PSMA4-221ENST00000560842 H3BQ15 152 aa-1.92□□□□□ -2.72
PSMA4-221ENST00000560842 MT1LQ93083 61 aa-1.92□□□□□ -2.72
PSMA4-221ENST00000560842 TOP2BQ02880 1626 aa-1.92□□□□□ -2.72
PSMA4-221ENST00000560842 H7BZZ5 65 aa-1.93□□□□□ -2.72
PSMA4-221ENST00000560842 K7EP13 123 aa-1.93□□□□□ -2.72
PSMA4-221ENST00000560842 MT1GP13640 62 aa-1.93□□□□□ -2.72
PSMA4-221ENST00000560842 SVBPQ8N300 66 aa-1.93□□□□□ -2.72
PSMA4-221ENST00000560842 IER3IP1Q9Y5U9 82 aa-1.93□□□□□ -2.72
PSMA4-221ENST00000560842 C4AP0C0L4 1744 aa-1.94□□□□□ -2.72
PSMA4-221ENST00000560842 C4BP0C0L5 1744 aa-1.94□□□□□ -2.72
PSMA4-221ENST00000560842 ALKQ9UM73 1620 aa-1.94□□□□□ -2.72
PSMA4-221ENST00000560842 MAPKBP1O60336 1514 aa-1.94□□□□□ -2.72
PSMA4-221ENST00000560842 SNAPC5O75971 98 aa-1.94□□□□□ -2.72
PSMA4-221ENST00000560842 PRLHP81277 87 aa-1.95□□□□□ -2.72
PSMA4-221ENST00000560842 KIF20BQ96Q89 1820 aa-1.96□□□□□ -2.72
PSMA4-221ENST00000560842 NDUFA3O95167 84 aa-1.96□□□□□ -2.72
PSMA4-221ENST00000560842 PSMG4Q5JS54 123 aa-1.96□□□□□ -2.72
PSMA4-221ENST00000560842 TSC22D3Q99576 134 aa-1.96□□□□□ -2.72
PSMA4-221ENST00000560842 MGAQ8IWI9 3026 aa-1.96□□□□□ -2.72
PSMA4-221ENST00000560842 SCN11AQ9UI33 1791 aa-1.97□□□□□ -2.72
PSMA4-221ENST00000560842 TARBP1Q13395 1621 aaKnown RBP-1.97□□□□□ -2.72
PSMA4-221ENST00000560842 COX6B2Q6YFQ2 88 aa-1.97□□□□□ -2.72
PSMA4-221ENST00000560842 MT1MQ8N339 61 aa-1.97□□□□□ -2.72
PSMA4-221ENST00000560842 TLN1Q9Y490 2541 aaKnown RBP-1.97□□□□□ -2.73
PSMA4-221ENST00000560842 PMCHL1Q16048 86 aa-1.98□□□□□ -2.73
PSMA4-221ENST00000560842 AP4S1Q9Y587 144 aa-1.98□□□□□ -2.73
PSMA4-221ENST00000560842 CUL7Q14999 1698 aa-1.99□□□□□ -2.73
PSMA4-221ENST00000560842 TRBV25-1A0A075B6N4 114 aa-1.99□□□□□ -2.73
PSMA4-221ENST00000560842 MT2AP02795 61 aa-1.99□□□□□ -2.73
PSMA4-221ENST00000560842 CACFD1Q9UGQ2 172 aa-1.99□□□□□ -2.73
PSMA4-221ENST00000560842 MYOM2P54296 1465 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 ARHGAP5Q13017 1502 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 UBR3Q6ZT12 1888 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 MT1BP07438 61 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 ASIPP42127 132 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 CLPSL2Q6UWE3 100 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 ABCC5O15440 1437 aa-2□□□□□ -2.73
PSMA4-221ENST00000560842 SAMD9Q5K651 1589 aa-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 SHPRHQ149N8 1683 aa-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 hADV29S1A0JD25 119 aa-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 UBE2D4Q9Y2X8 147 aa-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 ROCK2O75116 1388 aaKnown RBP-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 CUX1P39880 1505 aa-2.01□□□□□ -2.73
PSMA4-221ENST00000560842 NDUFC1O43677 76 aa-2.02□□□□□ -2.73
PSMA4-221ENST00000560842 GNG4P50150 75 aa-2.02□□□□□ -2.73
PSMA4-221ENST00000560842 KRTAP20-1Q3LI63 56 aa-2.02□□□□□ -2.73
PSMA4-221ENST00000560842 PPP3R1P63098 170 aa-2.03□□□□□ -2.73
PSMA4-221ENST00000560842 KRTAP8-1Q8IUC2 63 aa-2.04□□□□□ -2.74
PSMA4-221ENST00000560842 TOPAZ1Q8N9V7 1692 aa-2.04□□□□□ -2.74
PSMA4-221ENST00000560842 BOD1L1Q8NFC6 3051 aa-2.04□□□□□ -2.74
PSMA4-221ENST00000560842 MON2Q7Z3U7 1717 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 TIAM2Q8IVF5 1701 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 PREX1Q8TCU6 1659 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 IGLC2P0DOY2 106 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 IGLC3P0DOY3 106 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 ALKAL2Q6UX46 152 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 RGPD3A6NKT7 1758 aaPredicted RBP-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 RGPD8O14715 1765 aaPredicted RBP-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 RGPD4Q7Z3J3 1758 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 RGPD5Q99666 1765 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 CDC42BPAQ5VT25 1732 aa-2.05□□□□□ -2.74
PSMA4-221ENST00000560842 CSMD2Q7Z408 3487 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 MPC2O95563 127 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 S100A12P80511 92 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 HMGN3Q15651 99 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 TRGV9Q99603 122 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 QSER1Q2KHR3 1735 aa-2.06□□□□□ -2.74
PSMA4-221ENST00000560842 CORTO00230 105 aa-2.07□□□□□ -2.74
PSMA4-221ENST00000560842 UQCRHP07919 91 aa-2.07□□□□□ -2.74
PSMA4-221ENST00000560842 FAM107BQ9H098 131 aa-2.07□□□□□ -2.74
PSMA4-221ENST00000560842 TMEM218A2RU14 115 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 COX7BP24311 80 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 NRKQ7Z2Y5 1582 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 ABCC2Q92887 1545 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 MAGI2Q86UL8 1455 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 FREM2Q5SZK8 3169 aa-2.08□□□□□ -2.74
PSMA4-221ENST00000560842 C5P01031 1676 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 CDC42BPGQ6DT37 1551 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 C3orf79P0CE67 100 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 LINC00158P58513 81 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 RPL38P63173 70 aaKnown RBP-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 PRO3102Q9H379 93 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 NALCNQ8IZF0 1738 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 MLH3Q9UHC1 1453 aa-2.09□□□□□ -2.74
PSMA4-221ENST00000560842 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms