RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
AP4E1-203ENST00000560508 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
AP4E1-203ENST00000560508 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
AP4E1-203ENST00000560508 TLN1Q9Y490 2541 aaKnown RBP4.48□□□□□ -1.69
AP4E1-203ENST00000560508 SSBP3-AS1Q7Z2R9 100 aa4.48□□□□□ -1.69
AP4E1-203ENST00000560508 MYO18BQ8IUG5 2567 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 CHD9Q3L8U1 2897 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 TRANK1O15050 2925 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 CASC10Q5T4H9 136 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 XIRP2A4UGR9 3374 aa4.47□□□□□ -1.69
AP4E1-203ENST00000560508 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 IGLV7-43P04211 117 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 DSCR10P59022 87 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 CHD7Q9P2D1 2997 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 WIPF1O43516 503 aa4.46□□□□□ -1.7
AP4E1-203ENST00000560508 COA5Q86WW8 74 aa4.45□□□□□ -1.7
AP4E1-203ENST00000560508 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
AP4E1-203ENST00000560508 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
AP4E1-203ENST00000560508 LRRK2Q5S007 2527 aa4.45□□□□□ -1.7
AP4E1-203ENST00000560508 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
AP4E1-203ENST00000560508 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
AP4E1-203ENST00000560508 MKI67P46013 3256 aaKnown RBP4.43□□□□□ -1.7
AP4E1-203ENST00000560508 CHD8Q9HCK8 2581 aa4.43□□□□□ -1.7
AP4E1-203ENST00000560508 IGLV5-48A0A075B6I7 105 aa4.43□□□□□ -1.7
AP4E1-203ENST00000560508 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
AP4E1-203ENST00000560508 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
AP4E1-203ENST00000560508 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
AP4E1-203ENST00000560508 ANKRD11Q6UB99 2663 aaPredicted RBP4.41□□□□□ -1.7
AP4E1-203ENST00000560508 H7BZZ5 65 aa4.4□□□□□ -1.7
AP4E1-203ENST00000560508 ABCA2Q9BZC7 2435 aa4.4□□□□□ -1.71
AP4E1-203ENST00000560508 UNC80Q8N2C7 3258 aa4.39□□□□□ -1.71
AP4E1-203ENST00000560508 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
AP4E1-203ENST00000560508 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
AP4E1-203ENST00000560508 CD164Q04900 197 aa4.38□□□□□ -1.71
AP4E1-203ENST00000560508 VCANP13611 3396 aa4.37□□□□□ -1.71
AP4E1-203ENST00000560508 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
AP4E1-203ENST00000560508 J3QL48 77 aa4.36□□□□□ -1.71
AP4E1-203ENST00000560508 A8MUN3 132 aa4.36□□□□□ -1.71
AP4E1-203ENST00000560508 DOPEY1Q5JWR5 2465 aa4.36□□□□□ -1.71
AP4E1-203ENST00000560508 IGLV8-61A0A075B6I0 122 aa4.36□□□□□ -1.71
AP4E1-203ENST00000560508 CFAP54Q96N23 3096 aa4.35□□□□□ -1.71
AP4E1-203ENST00000560508 CDH23Q9H251 3354 aa4.35□□□□□ -1.71
AP4E1-203ENST00000560508 MYO9AB2RTY4 2548 aa4.35□□□□□ -1.71
AP4E1-203ENST00000560508 UQCR11O14957 56 aa4.35□□□□□ -1.71
AP4E1-203ENST00000560508 SMR3BP02814 79 aaPredicted RBP4.34□□□□□ -1.71
AP4E1-203ENST00000560508 ZNF462Q96JM2 2506 aa4.34□□□□□ -1.71
AP4E1-203ENST00000560508 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
AP4E1-203ENST00000560508 DNAH14Q0VDD8 3507 aa4.34□□□□□ -1.72
AP4E1-203ENST00000560508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
AP4E1-203ENST00000560508 TNP2Q05952 138 aa4.33□□□□□ -1.72
AP4E1-203ENST00000560508 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
AP4E1-203ENST00000560508 RANBP2P49792 3224 aaKnown RBP4.33□□□□□ -1.72
AP4E1-203ENST00000560508 SPRR1AP35321 89 aa4.33□□□□□ -1.72
AP4E1-203ENST00000560508 Q8NDZ9 215 aa4.33□□□□□ -1.72
AP4E1-203ENST00000560508 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
AP4E1-203ENST00000560508 PLAC8Q9NZF1 115 aa4.32□□□□□ -1.72
AP4E1-203ENST00000560508 TRIOO75962 3097 aa4.32□□□□□ -1.72
AP4E1-203ENST00000560508 C2CD3Q4AC94 2353 aa4.31□□□□□ -1.72
AP4E1-203ENST00000560508 JMJD1CQ15652 2540 aa4.31□□□□□ -1.72
AP4E1-203ENST00000560508 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
AP4E1-203ENST00000560508 ABCA12Q86UK0 2595 aa4.3□□□□□ -1.72
AP4E1-203ENST00000560508 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
AP4E1-203ENST00000560508 FN1P02751 2386 aaKnown RBP4.29□□□□□ -1.72
AP4E1-203ENST00000560508 RBM12B-AS1Q9P1G2 102 aa4.29□□□□□ -1.72
AP4E1-203ENST00000560508 PKD1L2Q7Z442 2459 aa4.29□□□□□ -1.72
AP4E1-203ENST00000560508 Q1T7F1 81 aa4.28□□□□□ -1.72
AP4E1-203ENST00000560508 ZFYVE26Q68DK2 2539 aa4.28□□□□□ -1.72
AP4E1-203ENST00000560508 SZT2Q5T011 3432 aa4.28□□□□□ -1.72
AP4E1-203ENST00000560508 SPTBN4Q9H254 2564 aa4.27□□□□□ -1.73
AP4E1-203ENST00000560508 SPRR1BP22528 89 aa4.27□□□□□ -1.73
AP4E1-203ENST00000560508 CEP295Q9C0D2 2601 aa4.27□□□□□ -1.73
AP4E1-203ENST00000560508 SPEGQ15772 3267 aa4.27□□□□□ -1.73
AP4E1-203ENST00000560508 IGLV7-46A0A075B6I9 117 aa4.27□□□□□ -1.73
AP4E1-203ENST00000560508 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
AP4E1-203ENST00000560508 MTORP42345 2549 aa4.26□□□□□ -1.73
AP4E1-203ENST00000560508 LAMA1P25391 3075 aa4.26□□□□□ -1.73
AP4E1-203ENST00000560508 USP9XQ93008 2570 aaPredicted RBP4.26□□□□□ -1.73
AP4E1-203ENST00000560508 FASNP49327 2511 aaKnown RBP4.25□□□□□ -1.73
AP4E1-203ENST00000560508 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
AP4E1-203ENST00000560508 EYSQ5T1H1 3165 aa4.25□□□□□ -1.73
AP4E1-203ENST00000560508 TLN2Q9Y4G6 2542 aa4.25□□□□□ -1.73
AP4E1-203ENST00000560508 WDFY3Q8IZQ1 3526 aa4.25□□□□□ -1.73
AP4E1-203ENST00000560508 Q8N1X5 172 aa4.25□□□□□ -1.73
AP4E1-203ENST00000560508 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
AP4E1-203ENST00000560508 SPTBN5Q9NRC6 3674 aaKnown RBP4.24□□□□□ -1.73
AP4E1-203ENST00000560508 MYO15AQ9UKN7 3530 aa4.23□□□□□ -1.73
AP4E1-203ENST00000560508 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
AP4E1-203ENST00000560508 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
AP4E1-203ENST00000560508 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
AP4E1-203ENST00000560508 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
AP4E1-203ENST00000560508 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
AP4E1-203ENST00000560508 HRES1P13985 223 aa4.21□□□□□ -1.74
AP4E1-203ENST00000560508 Q75L30 129 aa4.2□□□□□ -1.74
AP4E1-203ENST00000560508 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
AP4E1-203ENST00000560508 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
AP4E1-203ENST00000560508 POLQO75417 2590 aa4.19□□□□□ -1.74
AP4E1-203ENST00000560508 F8P00451 2351 aa4.19□□□□□ -1.74
AP4E1-203ENST00000560508 USP9YO00507 2555 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms