RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TCL1BO95988 128 aa8.73□□□□□ -1.01
PKNOX1-209ENST00000560448 PSMB2P49721 201 aa8.73□□□□□ -1.01
PKNOX1-209ENST00000560448 Q1RN00 199 aa8.73□□□□□ -1.01
PKNOX1-209ENST00000560448 TRBV20-1A0A075B6N2 111 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 M0QXV9 152 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 XAGE1AQ9HD64 81 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 PRO0461Q9UI25 63 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
PKNOX1-209ENST00000560448 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.01
PKNOX1-209ENST00000560448 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.01
PKNOX1-209ENST00000560448 PRR3P79522 188 aaKnown RBP8.71□□□□□ -1.01
PKNOX1-209ENST00000560448 FAM168BA1KXE4 195 aa8.71□□□□□ -1.02
PKNOX1-209ENST00000560448 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
PKNOX1-209ENST00000560448 F8W1H4 67 aa8.7□□□□□ -1.02
PKNOX1-209ENST00000560448 NDUFC2O95298 119 aa8.7□□□□□ -1.02
PKNOX1-209ENST00000560448 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
PKNOX1-209ENST00000560448 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
PKNOX1-209ENST00000560448 UBE2BP63146 152 aa8.68□□□□□ -1.02
PKNOX1-209ENST00000560448 MRPL55Q7Z7F7 128 aaKnown RBP8.68□□□□□ -1.02
PKNOX1-209ENST00000560448 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
PKNOX1-209ENST00000560448 COX6CP09669 75 aa8.67□□□□□ -1.02
PKNOX1-209ENST00000560448 SERTAD4-AS1Q5TG53 156 aa8.67□□□□□ -1.02
PKNOX1-209ENST00000560448 NKAPP1Q8N9T2 125 aa8.67□□□□□ -1.02
PKNOX1-209ENST00000560448 Q8NDZ9 215 aa8.67□□□□□ -1.02
PKNOX1-209ENST00000560448 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
PKNOX1-209ENST00000560448 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
PKNOX1-209ENST00000560448 ATXN8Q156A1 80 aa8.65□□□□□ -1.02
PKNOX1-209ENST00000560448 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
PKNOX1-209ENST00000560448 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
PKNOX1-209ENST00000560448 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
PKNOX1-209ENST00000560448 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
PKNOX1-209ENST00000560448 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
PKNOX1-209ENST00000560448 LST1O00453 97 aa8.63□□□□□ -1.03
PKNOX1-209ENST00000560448 VPREB1P12018 145 aa8.63□□□□□ -1.03
PKNOX1-209ENST00000560448 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
PKNOX1-209ENST00000560448 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
PKNOX1-209ENST00000560448 C1orf137Q5JT78 98 aa8.63□□□□□ -1.03
PKNOX1-209ENST00000560448 OXTP01178 125 aa8.62□□□□□ -1.03
PKNOX1-209ENST00000560448 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
PKNOX1-209ENST00000560448 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
PKNOX1-209ENST00000560448 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
PKNOX1-209ENST00000560448 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
PKNOX1-209ENST00000560448 TRBV10-2A0A0K0K1G8 114 aa8.6□□□□□ -1.03
PKNOX1-209ENST00000560448 C9JAW5 83 aa8.6□□□□□ -1.03
PKNOX1-209ENST00000560448 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
PKNOX1-209ENST00000560448 M0R378 163 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 NCR3O14931 201 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 SLC25A20O43772 301 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 ETDBQ3ZM63 59 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
PKNOX1-209ENST00000560448 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
PKNOX1-209ENST00000560448 IGLV1-50A0A075B6I6 118 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 H0YGX0 51 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 TRACP01848 142 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 DIRC1Q969H9 104 aa8.57□□□□□ -1.04
PKNOX1-209ENST00000560448 BCE1O60756 84 aa8.56□□□□□ -1.04
PKNOX1-209ENST00000560448 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
PKNOX1-209ENST00000560448 ANKRD29Q8N6D5 301 aa8.55□□□□□ -1.04
PKNOX1-209ENST00000560448 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 H3BT86 120 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 ZNF861PO60384 105 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 K7ERU9 68 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
PKNOX1-209ENST00000560448 H0Y9J4 135 aa8.53□□□□□ -1.04
PKNOX1-209ENST00000560448 J3QL48 77 aa8.53□□□□□ -1.04
PKNOX1-209ENST00000560448 TRBV10-3A0A0K0K1G6 114 aa8.52□□□□□ -1.05
PKNOX1-209ENST00000560448 PRYO14603 147 aa8.52□□□□□ -1.05
PKNOX1-209ENST00000560448 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
PKNOX1-209ENST00000560448 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
PKNOX1-209ENST00000560448 UBE2AP49459 152 aa8.5□□□□□ -1.05
PKNOX1-209ENST00000560448 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
PKNOX1-209ENST00000560448 PPDPFLQ8WWR9 84 aa8.5□□□□□ -1.05
PKNOX1-209ENST00000560448 A0A1B0GX51 115 aa8.49□□□□□ -1.05
PKNOX1-209ENST00000560448 SPRR1AP35321 89 aa8.48□□□□□ -1.05
PKNOX1-209ENST00000560448 TRAV23DV6A0A075B6W5 121 aa8.47□□□□□ -1.05
PKNOX1-209ENST00000560448 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
PKNOX1-209ENST00000560448 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
PKNOX1-209ENST00000560448 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.05
PKNOX1-209ENST00000560448 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.06
PKNOX1-209ENST00000560448 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
PKNOX1-209ENST00000560448 J3QR89 54 aa8.45□□□□□ -1.06
PKNOX1-209ENST00000560448 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
PKNOX1-209ENST00000560448 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
PKNOX1-209ENST00000560448 DNAL4O96015 105 aa8.44□□□□□ -1.06
PKNOX1-209ENST00000560448 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
PKNOX1-209ENST00000560448 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
PKNOX1-209ENST00000560448 ETDCA0A1B0GVM5 59 aa8.43□□□□□ -1.06
PKNOX1-209ENST00000560448 HERC1Q15751 4861 aa8.42□□□□□ -1.06
PKNOX1-209ENST00000560448 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
PKNOX1-209ENST00000560448 PRLHP81277 87 aa8.42□□□□□ -1.06
PKNOX1-209ENST00000560448 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
PKNOX1-209ENST00000560448 MT1HL1P0DM35 61 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms