RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NDUFC2O95298 119 aa8.52□□□□□ -1.05
SMAD3-214ENST00000560402 TRIAP1O43715 76 aa8.51□□□□□ -1.05
SMAD3-214ENST00000560402 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
SMAD3-214ENST00000560402 A0A096LNI7 61 aa8.5□□□□□ -1.05
SMAD3-214ENST00000560402 TCL1BO95988 128 aa8.5□□□□□ -1.05
SMAD3-214ENST00000560402 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
SMAD3-214ENST00000560402 K7ERU9 68 aa8.49□□□□□ -1.05
SMAD3-214ENST00000560402 OR13C6PQ8NH95 151 aa8.49□□□□□ -1.05
SMAD3-214ENST00000560402 J3QR89 54 aa8.48□□□□□ -1.05
SMAD3-214ENST00000560402 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
SMAD3-214ENST00000560402 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
SMAD3-214ENST00000560402 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
SMAD3-214ENST00000560402 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
SMAD3-214ENST00000560402 REG3GQ6UW15 175 aa8.46□□□□□ -1.06
SMAD3-214ENST00000560402 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
SMAD3-214ENST00000560402 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
SMAD3-214ENST00000560402 C6orf48Q9UBA6 75 aa8.46□□□□□ -1.06
SMAD3-214ENST00000560402 LRP2P98164 4655 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 C9JAW5 83 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 H0YGX0 51 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 M0QXV9 152 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 SNCGO76070 127 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-214ENST00000560402 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
SMAD3-214ENST00000560402 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
SMAD3-214ENST00000560402 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SMAD3-214ENST00000560402 LST1O00453 97 aa8.44□□□□□ -1.06
SMAD3-214ENST00000560402 Q6ZRP5 223 aa8.44□□□□□ -1.06
SMAD3-214ENST00000560402 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
SMAD3-214ENST00000560402 SLC25A20O43772 301 aa8.43□□□□□ -1.06
SMAD3-214ENST00000560402 OCIAD2Q56VL3 154 aa8.43□□□□□ -1.06
SMAD3-214ENST00000560402 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
SMAD3-214ENST00000560402 H3BT86 120 aa8.42□□□□□ -1.06
SMAD3-214ENST00000560402 TRACP01848 142 aa8.42□□□□□ -1.06
SMAD3-214ENST00000560402 DNAL4O96015 105 aa8.41□□□□□ -1.06
SMAD3-214ENST00000560402 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
SMAD3-214ENST00000560402 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
SMAD3-214ENST00000560402 NCR3O14931 201 aa8.4□□□□□ -1.06
SMAD3-214ENST00000560402 TEN1Q86WV5 123 aa8.4□□□□□ -1.06
SMAD3-214ENST00000560402 MTURNQ8N3F0 131 aa8.4□□□□□ -1.06
SMAD3-214ENST00000560402 ANKRD29Q8N6D5 301 aa8.4□□□□□ -1.06
SMAD3-214ENST00000560402 ETDBQ3ZM63 59 aa8.39□□□□□ -1.07
SMAD3-214ENST00000560402 A0A1B0GX51 115 aa8.38□□□□□ -1.07
SMAD3-214ENST00000560402 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
SMAD3-214ENST00000560402 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
SMAD3-214ENST00000560402 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
SMAD3-214ENST00000560402 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
SMAD3-214ENST00000560402 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
SMAD3-214ENST00000560402 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
SMAD3-214ENST00000560402 M0R378 163 aa8.36□□□□□ -1.07
SMAD3-214ENST00000560402 RPL18AQ02543 176 aaKnown RBP8.36□□□□□ -1.07
SMAD3-214ENST00000560402 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
SMAD3-214ENST00000560402 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
SMAD3-214ENST00000560402 NKAPP1Q8N9T2 125 aa8.35□□□□□ -1.07
SMAD3-214ENST00000560402 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
SMAD3-214ENST00000560402 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
SMAD3-214ENST00000560402 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
SMAD3-214ENST00000560402 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
SMAD3-214ENST00000560402 VPS25Q9BRG1 176 aa8.33□□□□□ -1.08
SMAD3-214ENST00000560402 PSORS1C2Q9UIG4 136 aa8.33□□□□□ -1.08
SMAD3-214ENST00000560402 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
SMAD3-214ENST00000560402 GHRHP01286 108 aa8.32□□□□□ -1.08
SMAD3-214ENST00000560402 VPREB1P12018 145 aa8.32□□□□□ -1.08
SMAD3-214ENST00000560402 H3BQ85 93 aa8.31□□□□□ -1.08
SMAD3-214ENST00000560402 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
SMAD3-214ENST00000560402 TRBV7-6A0A0J9YX20 115 aa8.3□□□□□ -1.08
SMAD3-214ENST00000560402 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
SMAD3-214ENST00000560402 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
SMAD3-214ENST00000560402 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
SMAD3-214ENST00000560402 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
SMAD3-214ENST00000560402 PHF5AQ7RTV0 110 aaKnown RBP8.29□□□□□ -1.08
SMAD3-214ENST00000560402 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
SMAD3-214ENST00000560402 Q8NDZ9 215 aa8.28□□□□□ -1.08
SMAD3-214ENST00000560402 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-214ENST00000560402 COX7BP24311 80 aa8.27□□□□□ -1.09
SMAD3-214ENST00000560402 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
SMAD3-214ENST00000560402 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
SMAD3-214ENST00000560402 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
SMAD3-214ENST00000560402 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
SMAD3-214ENST00000560402 H0Y9J4 135 aa8.25□□□□□ -1.09
SMAD3-214ENST00000560402 LINC00575Q6W349 94 aa8.25□□□□□ -1.09
SMAD3-214ENST00000560402 TMEM256-PLSCR3K7ERE1 68 aa8.24□□□□□ -1.09
SMAD3-214ENST00000560402 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-214ENST00000560402 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
SMAD3-214ENST00000560402 PRYO14603 147 aa8.23□□□□□ -1.09
SMAD3-214ENST00000560402 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
SMAD3-214ENST00000560402 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
SMAD3-214ENST00000560402 ELOF1P60002 83 aaKnown RBP8.22□□□□□ -1.09
SMAD3-214ENST00000560402 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
SMAD3-214ENST00000560402 JMJD7-PLA2G4BH0Y9G9 81 aa8.21□□□□□ -1.1
SMAD3-214ENST00000560402 UBE2BP63146 152 aa8.21□□□□□ -1.1
SMAD3-214ENST00000560402 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-214ENST00000560402 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
SMAD3-214ENST00000560402 FAM240AA0A1B0GVK7 77 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms