RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DDTP30046 118 aa8.89□□□□□ -0.99
SNRPA1-210ENST00000560383 IGLV6-57P01721 117 aa8.88□□□□□ -0.99
SNRPA1-210ENST00000560383 S100A12P80511 92 aa8.88□□□□□ -0.99
SNRPA1-210ENST00000560383 TMA7Q9Y2S6 64 aaKnown RBP8.88□□□□□ -0.99
SNRPA1-210ENST00000560383 ETDCA0A1B0GVM5 59 aa8.87□□□□□ -0.99
SNRPA1-210ENST00000560383 PRR4Q16378 134 aa8.87□□□□□ -0.99
SNRPA1-210ENST00000560383 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
SNRPA1-210ENST00000560383 MUC2Q02817 5179 aa8.87□□□□□ -0.99
SNRPA1-210ENST00000560383 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
SNRPA1-210ENST00000560383 B5MCH6 92 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 AKR1D1P51857 326 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 NPC2P61916 151 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 LINC00308Q8TCZ7 52 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
SNRPA1-210ENST00000560383 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
SNRPA1-210ENST00000560383 CTAG1AP78358 180 aa8.83□□□□□ -1
SNRPA1-210ENST00000560383 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
SNRPA1-210ENST00000560383 SPANXCQ9NY87 97 aa8.83□□□□□ -1
SNRPA1-210ENST00000560383 TSPAN13O95857 204 aa8.82□□□□□ -1
SNRPA1-210ENST00000560383 Q6ZRX8 168 aa8.82□□□□□ -1
SNRPA1-210ENST00000560383 ATOH7Q8N100 152 aa8.82□□□□□ -1
SNRPA1-210ENST00000560383 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
SNRPA1-210ENST00000560383 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
SNRPA1-210ENST00000560383 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
SNRPA1-210ENST00000560383 Q9BRP9 147 aa8.81□□□□□ -1
SNRPA1-210ENST00000560383 LINC00483Q53H64 154 aa8.8□□□□□ -1
SNRPA1-210ENST00000560383 ZNF73O43830 326 aaPredicted RBP8.79□□□□□ -1
SNRPA1-210ENST00000560383 ERC2-IT1O76042 136 aa8.79□□□□□ -1
SNRPA1-210ENST00000560383 SPANXDQ9BXN6 97 aa8.79□□□□□ -1
SNRPA1-210ENST00000560383 PPDPFQ9H3Y8 114 aa8.79□□□□□ -1
SNRPA1-210ENST00000560383 CBY1Q9Y3M2 126 aa8.79□□□□□ -1
SNRPA1-210ENST00000560383 SCGB1D1O95968 90 aa8.78□□□□□ -1
SNRPA1-210ENST00000560383 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
SNRPA1-210ENST00000560383 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
SNRPA1-210ENST00000560383 PCP2Q8IVA1 136 aa8.77□□□□□ -1.01
SNRPA1-210ENST00000560383 Q6ZVH6 145 aa8.76□□□□□ -1.01
SNRPA1-210ENST00000560383 LINC00518Q8N0U6 118 aa8.76□□□□□ -1.01
SNRPA1-210ENST00000560383 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
SNRPA1-210ENST00000560383 IFITM1P13164 125 aa8.75□□□□□ -1.01
SNRPA1-210ENST00000560383 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
SNRPA1-210ENST00000560383 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
SNRPA1-210ENST00000560383 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
SNRPA1-210ENST00000560383 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SNRPA1-210ENST00000560383 HINT1P49773 126 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-210ENST00000560383 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
SNRPA1-210ENST00000560383 Q8NBF4 154 aa8.7□□□□□ -1.02
SNRPA1-210ENST00000560383 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
SNRPA1-210ENST00000560383 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
SNRPA1-210ENST00000560383 MUSTN1Q8IVN3 82 aa8.69□□□□□ -1.02
SNRPA1-210ENST00000560383 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
SNRPA1-210ENST00000560383 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
SNRPA1-210ENST00000560383 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
SNRPA1-210ENST00000560383 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
SNRPA1-210ENST00000560383 SPRR1BP22528 89 aa8.67□□□□□ -1.02
SNRPA1-210ENST00000560383 C6orf99Q4VX62 202 aa8.67□□□□□ -1.02
SNRPA1-210ENST00000560383 ST20-AS1Q8NBB2 130 aa8.67□□□□□ -1.02
SNRPA1-210ENST00000560383 SPINK1P00995 79 aa8.66□□□□□ -1.02
SNRPA1-210ENST00000560383 COX7BP24311 80 aa8.66□□□□□ -1.02
SNRPA1-210ENST00000560383 MOBPQ13875 183 aa8.66□□□□□ -1.02
SNRPA1-210ENST00000560383 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
SNRPA1-210ENST00000560383 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
SNRPA1-210ENST00000560383 IGLV9-49A0A0B4J1Y8 123 aa8.65□□□□□ -1.02
SNRPA1-210ENST00000560383 PAM16Q9Y3D7 125 aa8.65□□□□□ -1.02
SNRPA1-210ENST00000560383 RPS29P62273 56 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-210ENST00000560383 MUC17Q685J3 4493 aa8.64□□□□□ -1.03
SNRPA1-210ENST00000560383 TRAV13-2A0A0B4J235 113 aa8.63□□□□□ -1.03
SNRPA1-210ENST00000560383 A6NDN8 102 aa8.63□□□□□ -1.03
SNRPA1-210ENST00000560383 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
SNRPA1-210ENST00000560383 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
SNRPA1-210ENST00000560383 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
SNRPA1-210ENST00000560383 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
SNRPA1-210ENST00000560383 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
SNRPA1-210ENST00000560383 COX8AP10176 69 aa8.61□□□□□ -1.03
SNRPA1-210ENST00000560383 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
SNRPA1-210ENST00000560383 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
SNRPA1-210ENST00000560383 A4D1N5 150 aa8.59□□□□□ -1.03
SNRPA1-210ENST00000560383 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
SNRPA1-210ENST00000560383 DLEU1O43261 78 aa8.58□□□□□ -1.04
SNRPA1-210ENST00000560383 C9orf153Q5TBE3 101 aa8.58□□□□□ -1.04
SNRPA1-210ENST00000560383 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
SNRPA1-210ENST00000560383 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
SNRPA1-210ENST00000560383 Q8N377 158 aa8.57□□□□□ -1.04
SNRPA1-210ENST00000560383 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
SNRPA1-210ENST00000560383 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
SNRPA1-210ENST00000560383 TEX49A0A1B0GTD5 131 aa8.56□□□□□ -1.04
SNRPA1-210ENST00000560383 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
SNRPA1-210ENST00000560383 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
SNRPA1-210ENST00000560383 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
SNRPA1-210ENST00000560383 TAL2Q16559 108 aa8.55□□□□□ -1.04
SNRPA1-210ENST00000560383 SLC25A20O43772 301 aa8.54□□□□□ -1.04
SNRPA1-210ENST00000560383 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
SNRPA1-210ENST00000560383 NHP2Q9NX24 153 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-210ENST00000560383 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
SNRPA1-210ENST00000560383 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
SNRPA1-210ENST00000560383 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
SNRPA1-210ENST00000560383 HIST1H4GQ99525 98 aa8.52□□□□□ -1.05
SNRPA1-210ENST00000560383 SMIM6P0DI80 62 aa8.51□□□□□ -1.05
SNRPA1-210ENST00000560383 VAMP3Q15836 100 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 219.9 ms