RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
TPM1-222ENST00000560131 LELP1Q5T871 98 aa3.35□□□□□ -1.87
TPM1-222ENST00000560131 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
TPM1-222ENST00000560131 C6orf48Q9UBA6 75 aa3.35□□□□□ -1.87
TPM1-222ENST00000560131 CREBBPQ92793 2442 aa3.34□□□□□ -1.87
TPM1-222ENST00000560131 ANGP03950 147 aaKnown RBP3.34□□□□□ -1.87
TPM1-222ENST00000560131 DSCR10P59022 87 aa3.34□□□□□ -1.87
TPM1-222ENST00000560131 Q8N9L7 120 aa3.34□□□□□ -1.87
TPM1-222ENST00000560131 B9D2Q9BPU9 175 aa3.34□□□□□ -1.87
TPM1-222ENST00000560131 CELSR3Q9NYQ7 3312 aa3.34□□□□□ -1.87
TPM1-222ENST00000560131 SMG1Q96Q15 3661 aaKnown RBP3.34□□□□□ -1.88
TPM1-222ENST00000560131 AKAP6Q13023 2319 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 A0A1W2PNM2 257 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 MP68P56378 58 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 WNK1Q9H4A3 2382 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 SPTA1P02549 2419 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 HIVEP3Q5T1R4 2406 aa3.33□□□□□ -1.88
TPM1-222ENST00000560131 A8MUN3 132 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 SPRR1AP35321 89 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 APOC4P55056 127 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 CLPSL2Q6UWE3 100 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 BSNQ9UPA5 3926 aa3.32□□□□□ -1.88
TPM1-222ENST00000560131 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 A6NN06 94 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
TPM1-222ENST00000560131 C3orf84H3BNL1 204 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 PSPHP1O15172 72 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 DEFB130BP0DP73 79 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 DEFB130AP0DP74 79 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 C1orf137Q5JT78 98 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 LINC00208Q96KT6 92 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 DMDP11532 3685 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 ZFHX4Q86UP3 3567 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 BDP1A6H8Y1 2624 aa3.31□□□□□ -1.88
TPM1-222ENST00000560131 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 DMXL2Q8TDJ6 3036 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 TACC2O95359 2948 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 H3BNG1 76 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 CHTF8P0CG12 524 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 Q6ZRX8 168 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 C9orf163Q8N9P6 203 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 XAGE1AQ9HD64 81 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 PLAC8Q9NZF1 115 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 CSPG4Q6UVK1 2322 aa3.3□□□□□ -1.88
TPM1-222ENST00000560131 C2CD3Q4AC94 2353 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 CHKB-CPT1BH3BT56 60 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 K7EQZ3 153 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 MT3P25713 68 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 LOC400499M0QZD8 3231 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 DCHS2Q6V1P9 2916 aa3.29□□□□□ -1.88
TPM1-222ENST00000560131 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 LRCOL1A6NCL2 159 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 WFDC10AQ9H1F0 79 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 AKAP13Q12802 2813 aa3.28□□□□□ -1.88
TPM1-222ENST00000560131 GVINP1Q7Z2Y8 2422 aa3.28□□□□□ -1.89
TPM1-222ENST00000560131 ADGRG4Q8IZF6 3080 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 CNBPP62633 177 aaKnown RBP3.27□□□□□ -1.89
TPM1-222ENST00000560131 LCA10Q71F78 164 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 DCHS1Q96JQ0 3298 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 ZNF292O60281 2723 aa3.27□□□□□ -1.89
TPM1-222ENST00000560131 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
TPM1-222ENST00000560131 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
TPM1-222ENST00000560131 A0A096LPF7 62 aa3.26□□□□□ -1.89
TPM1-222ENST00000560131 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
TPM1-222ENST00000560131 H0Y9P7 68 aa3.25□□□□□ -1.89
TPM1-222ENST00000560131 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
TPM1-222ENST00000560131 MGAQ8IWI9 3026 aa3.25□□□□□ -1.89
TPM1-222ENST00000560131 ZFHX3Q15911 3703 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 A6NED7 52 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 COA5Q86WW8 74 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 Q8NAQ8 132 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 TP53AIP1Q9HCN2 124 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 ATRXP46100 2492 aa3.24□□□□□ -1.89
TPM1-222ENST00000560131 LRBAP50851 2863 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 A8MU10 97 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 A8MWP4 228 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 SPRR1BP22528 89 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 CASC2Q6XLA1 102 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 DEFB105AQ8NG35 78 aa3.23□□□□□ -1.89
TPM1-222ENST00000560131 NBASA2RRP1 2371 aa3.22□□□□□ -1.89
TPM1-222ENST00000560131 CEP295Q9C0D2 2601 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms