RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FABP2P12104 132 aa7.62□□□□□ -1.19
HERC1-205ENST00000559886 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
HERC1-205ENST00000559886 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
HERC1-205ENST00000559886 DIRC1Q969H9 104 aa7.61□□□□□ -1.19
HERC1-205ENST00000559886 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
HERC1-205ENST00000559886 UBE2BP63146 152 aa7.61□□□□□ -1.19
HERC1-205ENST00000559886 LYRM7Q5U5X0 104 aa7.61□□□□□ -1.19
HERC1-205ENST00000559886 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
HERC1-205ENST00000559886 A0A1B0GV90 55 aa7.6□□□□□ -1.19
HERC1-205ENST00000559886 SPRR1AP35321 89 aa7.6□□□□□ -1.19
HERC1-205ENST00000559886 TRBV7-6A0A0J9YX20 115 aa7.59□□□□□ -1.19
HERC1-205ENST00000559886 H0YGX0 51 aa7.59□□□□□ -1.19
HERC1-205ENST00000559886 VAMP3Q15836 100 aa7.59□□□□□ -1.19
HERC1-205ENST00000559886 REG3GQ6UW15 175 aa7.59□□□□□ -1.19
HERC1-205ENST00000559886 KRTAP4-16G5E9R7 235 aaPredicted RBP7.59□□□□□ -1.19
HERC1-205ENST00000559886 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
HERC1-205ENST00000559886 SPCS1Q9Y6A9 102 aa7.58□□□□□ -1.2
HERC1-205ENST00000559886 TRBV20-1A0A075B6N2 111 aa7.57□□□□□ -1.2
HERC1-205ENST00000559886 TCL1BO95988 128 aa7.57□□□□□ -1.2
HERC1-205ENST00000559886 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
HERC1-205ENST00000559886 HAMPP81172 84 aa7.57□□□□□ -1.2
HERC1-205ENST00000559886 COX7BP24311 80 aa7.57□□□□□ -1.2
HERC1-205ENST00000559886 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
HERC1-205ENST00000559886 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
HERC1-205ENST00000559886 B5MCH6 92 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 K7EP34 96 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 LST1O00453 97 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 ATXN8Q156A1 80 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
HERC1-205ENST00000559886 Q6ZRX8 168 aa7.54□□□□□ -1.2
HERC1-205ENST00000559886 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
HERC1-205ENST00000559886 XGP55808 180 aa7.54□□□□□ -1.2
HERC1-205ENST00000559886 GTF2H5Q6ZYL4 71 aa7.54□□□□□ -1.2
HERC1-205ENST00000559886 PSORS1C2Q9UIG4 136 aa7.54□□□□□ -1.2
HERC1-205ENST00000559886 A0A1B0GX51 115 aa7.53□□□□□ -1.2
HERC1-205ENST00000559886 H3BMG7 143 aa7.53□□□□□ -1.2
HERC1-205ENST00000559886 BCE1O60756 84 aa7.53□□□□□ -1.2
HERC1-205ENST00000559886 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
HERC1-205ENST00000559886 TRACP01848 142 aa7.52□□□□□ -1.21
HERC1-205ENST00000559886 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
HERC1-205ENST00000559886 H0Y9J4 135 aa7.51□□□□□ -1.21
HERC1-205ENST00000559886 Q9BRP9 147 aa7.51□□□□□ -1.21
HERC1-205ENST00000559886 hADV29S1A0JD25 119 aa7.51□□□□□ -1.21
HERC1-205ENST00000559886 SLC25A20O43772 301 aa7.51□□□□□ -1.21
HERC1-205ENST00000559886 SNCGO76070 127 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 PRLHP81277 87 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 UBE2V1Q13404 147 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 DHRS4-AS1Q9P1J3 65 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 C1orf137Q5JT78 98 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
HERC1-205ENST00000559886 UBE2AP49459 152 aa7.49□□□□□ -1.21
HERC1-205ENST00000559886 DNAL4O96015 105 aa7.48□□□□□ -1.21
HERC1-205ENST00000559886 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
HERC1-205ENST00000559886 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
HERC1-205ENST00000559886 C9JAW5 83 aa7.47□□□□□ -1.21
HERC1-205ENST00000559886 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
HERC1-205ENST00000559886 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.46□□□□□ -1.22
HERC1-205ENST00000559886 Q6ZQY7 126 aa7.46□□□□□ -1.22
HERC1-205ENST00000559886 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
HERC1-205ENST00000559886 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
HERC1-205ENST00000559886 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
HERC1-205ENST00000559886 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
HERC1-205ENST00000559886 CDK2AP2O75956 126 aa7.45□□□□□ -1.22
HERC1-205ENST00000559886 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
HERC1-205ENST00000559886 ZNF861PO60384 105 aa7.44□□□□□ -1.22
HERC1-205ENST00000559886 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
HERC1-205ENST00000559886 ORMDL1Q9P0S3 153 aa7.44□□□□□ -1.22
HERC1-205ENST00000559886 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
HERC1-205ENST00000559886 F8W1H4 67 aa7.43□□□□□ -1.22
HERC1-205ENST00000559886 BAALC-AS2P0C853 105 aa7.43□□□□□ -1.22
HERC1-205ENST00000559886 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
HERC1-205ENST00000559886 OCIAD2Q56VL3 154 aa7.42□□□□□ -1.22
HERC1-205ENST00000559886 HSPG2P98160 4391 aa7.42□□□□□ -1.22
HERC1-205ENST00000559886 H3BT86 120 aa7.42□□□□□ -1.22
HERC1-205ENST00000559886 ST20-AS1Q8NBB2 130 aa7.42□□□□□ -1.22
HERC1-205ENST00000559886 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
HERC1-205ENST00000559886 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
HERC1-205ENST00000559886 ANKRD29Q8N6D5 301 aa7.41□□□□□ -1.22
HERC1-205ENST00000559886 FAT1Q14517 4588 aa7.41□□□□□ -1.22
HERC1-205ENST00000559886 IGLV5-48A0A075B6I7 105 aa7.4□□□□□ -1.22
HERC1-205ENST00000559886 GHRHP01286 108 aa7.4□□□□□ -1.22
HERC1-205ENST00000559886 LINC01547P58512 204 aaPredicted RBP7.4□□□□□ -1.22
HERC1-205ENST00000559886 H3BQ85 93 aa7.4□□□□□ -1.23
HERC1-205ENST00000559886 TMEM256-PLSCR3K7ERE1 68 aa7.4□□□□□ -1.23
HERC1-205ENST00000559886 Q8N377 158 aa7.39□□□□□ -1.23
HERC1-205ENST00000559886 DEFB105AQ8NG35 78 aa7.39□□□□□ -1.23
HERC1-205ENST00000559886 PPDPFLQ8WWR9 84 aa7.38□□□□□ -1.23
HERC1-205ENST00000559886 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
HERC1-205ENST00000559886 TEX49A0A1B0GTD5 131 aa7.37□□□□□ -1.23
HERC1-205ENST00000559886 RYR1P21817 5038 aa7.37□□□□□ -1.23
HERC1-205ENST00000559886 SPRR1BP22528 89 aa7.36□□□□□ -1.23
HERC1-205ENST00000559886 SPRR4Q96PI1 79 aa7.36□□□□□ -1.23
HERC1-205ENST00000559886 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
HERC1-205ENST00000559886 GAGE2AQ6NT46 116 aa7.35□□□□□ -1.23
HERC1-205ENST00000559886 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
HERC1-205ENST00000559886 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
HERC1-205ENST00000559886 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
HERC1-205ENST00000559886 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
HERC1-205ENST00000559886 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms