RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
USP3-AS1-203ENST00000559737 SPRR1AP35321 89 aa11.44□□□□□ -0.58
USP3-AS1-203ENST00000559737 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
USP3-AS1-203ENST00000559737 IGLV7-43P04211 117 aa11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 HINT1P49773 126 aaPredicted RBP11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 RPL13AP40429 203 aaKnown RBP11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 RAB37Q96AX2 223 aa11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
USP3-AS1-203ENST00000559737 KRTAP4-16G5E9R7 235 aaPredicted RBP11.42□□□□□ -0.58
USP3-AS1-203ENST00000559737 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
USP3-AS1-203ENST00000559737 FAM19A1Q7Z5A9 133 aa11.42□□□□□ -0.58
USP3-AS1-203ENST00000559737 PRLHP81277 87 aa11.4□□□□□ -0.58
USP3-AS1-203ENST00000559737 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.58
USP3-AS1-203ENST00000559737 CBY1Q9Y3M2 126 aa11.4□□□□□ -0.58
USP3-AS1-203ENST00000559737 ETDCA0A1B0GVM5 59 aa11.39□□□□□ -0.59
USP3-AS1-203ENST00000559737 K7ERJ3 54 aa11.39□□□□□ -0.59
USP3-AS1-203ENST00000559737 M0R143 59 aa11.39□□□□□ -0.59
USP3-AS1-203ENST00000559737 UBE2AP49459 152 aa11.39□□□□□ -0.59
USP3-AS1-203ENST00000559737 H7C2G1 150 aa11.38□□□□□ -0.59
USP3-AS1-203ENST00000559737 C6orf99Q4VX62 202 aa11.38□□□□□ -0.59
USP3-AS1-203ENST00000559737 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
USP3-AS1-203ENST00000559737 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
USP3-AS1-203ENST00000559737 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
USP3-AS1-203ENST00000559737 DIRC1Q969H9 104 aa11.37□□□□□ -0.59
USP3-AS1-203ENST00000559737 B5MCH6 92 aa11.36□□□□□ -0.59
USP3-AS1-203ENST00000559737 ZNF861PO60384 105 aa11.36□□□□□ -0.59
USP3-AS1-203ENST00000559737 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
USP3-AS1-203ENST00000559737 RPL28P46779 137 aaKnown RBP11.35□□□□□ -0.59
USP3-AS1-203ENST00000559737 PCP4L1A6NKN8 68 aa11.33□□□□□ -0.6
USP3-AS1-203ENST00000559737 H0Y9J4 135 aa11.33□□□□□ -0.6
USP3-AS1-203ENST00000559737 BATFQ16520 125 aa11.33□□□□□ -0.6
USP3-AS1-203ENST00000559737 Q6ZRX8 168 aa11.33□□□□□ -0.6
USP3-AS1-203ENST00000559737 Q1RN00 199 aa11.32□□□□□ -0.6
USP3-AS1-203ENST00000559737 SPINK6Q6UWN8 80 aa11.32□□□□□ -0.6
USP3-AS1-203ENST00000559737 COX7BP24311 80 aa11.31□□□□□ -0.6
USP3-AS1-203ENST00000559737 ELOF1P60002 83 aaKnown RBP11.31□□□□□ -0.6
USP3-AS1-203ENST00000559737 Q9BRP9 147 aa11.31□□□□□ -0.6
USP3-AS1-203ENST00000559737 HIGD2AQ9BW72 106 aa11.31□□□□□ -0.6
USP3-AS1-203ENST00000559737 SMCR5Q8TEV8 140 aa11.3□□□□□ -0.6
USP3-AS1-203ENST00000559737 TRBV7-6A0A0J9YX20 115 aa11.29□□□□□ -0.6
USP3-AS1-203ENST00000559737 TSPAN13O95857 204 aa11.28□□□□□ -0.6
USP3-AS1-203ENST00000559737 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.6
USP3-AS1-203ENST00000559737 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.6
USP3-AS1-203ENST00000559737 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
USP3-AS1-203ENST00000559737 VAMP3Q15836 100 aa11.26□□□□□ -0.61
USP3-AS1-203ENST00000559737 ABCA13Q86UQ4 5058 aa11.25□□□□□ -0.61
USP3-AS1-203ENST00000559737 TRIAP1O43715 76 aa11.25□□□□□ -0.61
USP3-AS1-203ENST00000559737 SNHG12Q9BXW3 62 aa11.25□□□□□ -0.61
USP3-AS1-203ENST00000559737 PSMB2P49721 201 aa11.22□□□□□ -0.61
USP3-AS1-203ENST00000559737 DHRS4-AS1Q9P1J3 65 aa11.22□□□□□ -0.61
USP3-AS1-203ENST00000559737 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
USP3-AS1-203ENST00000559737 NAA38Q9BRA0 125 aaKnown RBP11.2□□□□□ -0.62
USP3-AS1-203ENST00000559737 H0YGX0 51 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 FAM218AQ96MZ4 157 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 SPRR4Q96PI1 79 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 ANAPC11Q9NYG5 84 aa11.18□□□□□ -0.62
USP3-AS1-203ENST00000559737 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
USP3-AS1-203ENST00000559737 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
USP3-AS1-203ENST00000559737 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
USP3-AS1-203ENST00000559737 SLC25A20O43772 301 aa11.16□□□□□ -0.62
USP3-AS1-203ENST00000559737 CLEC2BQ92478 149 aa11.16□□□□□ -0.62
USP3-AS1-203ENST00000559737 MYCBP2O75592 4640 aa11.15□□□□□ -0.62
USP3-AS1-203ENST00000559737 FAT3Q8TDW7 4589 aa11.15□□□□□ -0.62
USP3-AS1-203ENST00000559737 COX6CP09669 75 aa11.15□□□□□ -0.62
USP3-AS1-203ENST00000559737 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
USP3-AS1-203ENST00000559737 ZNF706Q9Y5V0 76 aaPredicted RBP11.14□□□□□ -0.63
USP3-AS1-203ENST00000559737 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
USP3-AS1-203ENST00000559737 H3BUT2 72 aa11.11□□□□□ -0.63
USP3-AS1-203ENST00000559737 C9orf118A6NHY6 69 aa11.1□□□□□ -0.63
USP3-AS1-203ENST00000559737 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
USP3-AS1-203ENST00000559737 Q6ZQY7 126 aa11.1□□□□□ -0.63
USP3-AS1-203ENST00000559737 DEFB105AQ8NG35 78 aa11.1□□□□□ -0.63
USP3-AS1-203ENST00000559737 A0A087X002 238 aa11.09□□□□□ -0.63
USP3-AS1-203ENST00000559737 LINC01547P58512 204 aaPredicted RBP11.09□□□□□ -0.63
USP3-AS1-203ENST00000559737 LINC00483Q53H64 154 aa11.09□□□□□ -0.63
USP3-AS1-203ENST00000559737 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
USP3-AS1-203ENST00000559737 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
USP3-AS1-203ENST00000559737 A0A1B0GX51 115 aa11.08□□□□□ -0.64
USP3-AS1-203ENST00000559737 FAM229BQ4G0N7 80 aa11.07□□□□□ -0.64
USP3-AS1-203ENST00000559737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.07□□□□□ -0.64
USP3-AS1-203ENST00000559737 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
USP3-AS1-203ENST00000559737 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
USP3-AS1-203ENST00000559737 IGLV5-48A0A075B6I7 105 aa11.06□□□□□ -0.64
USP3-AS1-203ENST00000559737 SNCGO76070 127 aa11.06□□□□□ -0.64
USP3-AS1-203ENST00000559737 OXTP01178 125 aa11.06□□□□□ -0.64
USP3-AS1-203ENST00000559737 SPRR1BP22528 89 aa11.06□□□□□ -0.64
USP3-AS1-203ENST00000559737 PCLOQ9Y6V0 5065 aa11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 LST1O00453 97 aa11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 CRYGAP11844 174 aa11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 Q8N377 158 aa11.05□□□□□ -0.64
USP3-AS1-203ENST00000559737 TCL1BO95988 128 aa11.04□□□□□ -0.64
USP3-AS1-203ENST00000559737 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
USP3-AS1-203ENST00000559737 A0A1W2PPM0 123 aa11.03□□□□□ -0.64
USP3-AS1-203ENST00000559737 C3orf22Q8N5N4 141 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms