RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.75
CHRNA3-204ENST00000559002 LINC00337Q8N6G1 96 aa4.09□□□□□ -1.75
CHRNA3-204ENST00000559002 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 ETDCA0A1B0GVM5 59 aa4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 M0R143 59 aa4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 BCE1O60756 84 aa4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 RPL13AP40429 203 aaKnown RBP4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 NHP2Q9NX24 153 aaKnown RBP4.08□□□□□ -1.76
CHRNA3-204ENST00000559002 A0A0B4J2C4 111 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 ZNF73O43830 326 aaPredicted RBP4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 CFC1BP0CG36 223 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 CFC1P0CG37 223 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 UBE2AP49459 152 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 HINT1P49773 126 aaPredicted RBP4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 BVES-AS1Q5T3Y7 98 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 FAM19A1Q7Z5A9 133 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
CHRNA3-204ENST00000559002 H7C2G1 150 aa4.06□□□□□ -1.76
CHRNA3-204ENST00000559002 IGLV7-43P04211 117 aa4.06□□□□□ -1.76
CHRNA3-204ENST00000559002 RPL28P46779 137 aaKnown RBP4.06□□□□□ -1.76
CHRNA3-204ENST00000559002 Q1RN00 199 aa4.06□□□□□ -1.76
CHRNA3-204ENST00000559002 K7ERJ3 54 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 SPRR1AP35321 89 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 PRLHP81277 87 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 BATFQ16520 125 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 SMIM11BQ8TCY0 68 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
CHRNA3-204ENST00000559002 PCP4L1A6NKN8 68 aa4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 ZNF861PO60384 105 aa4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 COX7BP24311 80 aa4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 KRTAP10-4P60372 401 aaPredicted RBP4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 VAMP3Q15836 100 aa4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 HIGD2AQ9BW72 106 aa4.04□□□□□ -1.76
CHRNA3-204ENST00000559002 TRBV7-6A0A0J9YX20 115 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 A0A1B0GWB2 263 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 B5MCH6 92 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 KRTAP4-16G5E9R7 235 aaPredicted RBP4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 H0Y9J4 135 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 SPINK6Q6UWN8 80 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 Q6ZRX8 168 aa4.03□□□□□ -1.76
CHRNA3-204ENST00000559002 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
CHRNA3-204ENST00000559002 PSMB2P49721 201 aa4.02□□□□□ -1.77
CHRNA3-204ENST00000559002 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
CHRNA3-204ENST00000559002 KRTAP13-1Q8IUC0 172 aa4.02□□□□□ -1.77
CHRNA3-204ENST00000559002 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
CHRNA3-204ENST00000559002 SLC25A20O43772 301 aa4.01□□□□□ -1.77
CHRNA3-204ENST00000559002 TSPAN13O95857 204 aa4.01□□□□□ -1.77
CHRNA3-204ENST00000559002 INAFM2P0DMQ5 153 aa4.01□□□□□ -1.77
CHRNA3-204ENST00000559002 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
CHRNA3-204ENST00000559002 MYCBP2O75592 4640 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 H0YGX0 51 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 TRIAP1O43715 76 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 SNCGO76070 127 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 COX6CP09669 75 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 SMCR5Q8TEV8 140 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 Q9BRP9 147 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
CHRNA3-204ENST00000559002 SCGB1C2P0DMR2 95 aa3.99□□□□□ -1.77
CHRNA3-204ENST00000559002 SNHG12Q9BXW3 62 aa3.99□□□□□ -1.77
CHRNA3-204ENST00000559002 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
CHRNA3-204ENST00000559002 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
CHRNA3-204ENST00000559002 ERC2-IT1O76042 136 aa3.98□□□□□ -1.77
CHRNA3-204ENST00000559002 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
CHRNA3-204ENST00000559002 COL5A1-AS1Q5SY13 56 aa3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 LYRM7Q5U5X0 104 aa3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 GAGE2AQ6NT46 116 aa3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 SPRR4Q96PI1 79 aa3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
CHRNA3-204ENST00000559002 LRP1Q07954 4544 aaKnown RBP3.96□□□□□ -1.77
CHRNA3-204ENST00000559002 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.77
CHRNA3-204ENST00000559002 A0A1B0GX51 115 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 H3BUT2 72 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 TAX1BP3O14907 124 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 DNAL4O96015 105 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 Q6ZQY7 126 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 ST20-AS1Q8NBB2 130 aa3.96□□□□□ -1.78
CHRNA3-204ENST00000559002 C9orf118A6NHY6 69 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 CRYGAP11844 174 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 DEFB105AQ8NG35 78 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
CHRNA3-204ENST00000559002 TEX49A0A1B0GTD5 131 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 OXTP01178 125 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 GHRHP01286 108 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 FABP2P12104 132 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 LINC00483Q53H64 154 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 TNXBP22105 4242 aa3.94□□□□□ -1.78
CHRNA3-204ENST00000559002 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 A0A1W2PPM0 123 aa3.93□□□□□ -1.78
CHRNA3-204ENST00000559002 LST1O00453 97 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms