RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 COX17Q14061 63 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 SVBPQ8N300 66 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 IFI27L1Q96BM0 104 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
SPG11-213ENST00000558988 BOD1L2Q8IYS8 172 aa4.25□□□□□ -1.73
SPG11-213ENST00000558988 FAM19A2Q8N3H0 131 aa4.25□□□□□ -1.73
SPG11-213ENST00000558988 TNXBP22105 4242 aa4.25□□□□□ -1.73
SPG11-213ENST00000558988 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 TMEM223A0PJW6 202 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 HSBP1O75506 76 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 SFTA2Q6UW10 78 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 PLEKHB2Q96CS7 222 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
SPG11-213ENST00000558988 PCP4L1A6NKN8 68 aa4.23□□□□□ -1.73
SPG11-213ENST00000558988 MIR7-3HGQ8N6C7 128 aa4.23□□□□□ -1.73
SPG11-213ENST00000558988 DAND5Q8N907 189 aa4.23□□□□□ -1.73
SPG11-213ENST00000558988 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
SPG11-213ENST00000558988 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
SPG11-213ENST00000558988 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
SPG11-213ENST00000558988 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
SPG11-213ENST00000558988 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
SPG11-213ENST00000558988 ETDCA0A1B0GVM5 59 aa4.22□□□□□ -1.73
SPG11-213ENST00000558988 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
SPG11-213ENST00000558988 TRBV10-3A0A0K0K1G6 114 aa4.21□□□□□ -1.74
SPG11-213ENST00000558988 MYMXA0A1B0GTQ4 84 aa4.21□□□□□ -1.74
SPG11-213ENST00000558988 FABP4P15090 132 aa4.21□□□□□ -1.74
SPG11-213ENST00000558988 PMCHL2Q9BQD1 86 aa4.21□□□□□ -1.74
SPG11-213ENST00000558988 SERF1AO75920 110 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 TRGC2P03986 189 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 Q8NBF4 154 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 SMCR5Q8TEV8 140 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 YPEL4Q96NS1 127 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 MAP1LC3CQ9BXW4 147 aa4.2□□□□□ -1.74
SPG11-213ENST00000558988 ZNF706Q9Y5V0 76 aaPredicted RBP4.2□□□□□ -1.74
SPG11-213ENST00000558988 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
SPG11-213ENST00000558988 NPC2P61916 151 aa4.19□□□□□ -1.74
SPG11-213ENST00000558988 S100A12P80511 92 aa4.19□□□□□ -1.74
SPG11-213ENST00000558988 MIEN1Q9BRT3 115 aa4.19□□□□□ -1.74
SPG11-213ENST00000558988 LPAP08519 4548 aa4.18□□□□□ -1.74
SPG11-213ENST00000558988 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
SPG11-213ENST00000558988 LGALS3P17931 250 aaKnown RBP4.18□□□□□ -1.74
SPG11-213ENST00000558988 DDTP30046 118 aa4.18□□□□□ -1.74
SPG11-213ENST00000558988 HERVK_113P61574 105 aa4.18□□□□□ -1.74
SPG11-213ENST00000558988 MOBPQ13875 183 aa4.18□□□□□ -1.74
SPG11-213ENST00000558988 J3QQQ9 107 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 LEPROTO15243 131 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 ERC2-IT1O76042 136 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 DPM2O94777 84 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 PLNP26678 52 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 TPRXLQ17RH7 258 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 S100A7L2Q5SY68 101 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
SPG11-213ENST00000558988 IGKCP01834 107 aa4.16□□□□□ -1.74
SPG11-213ENST00000558988 SPRR1AP35321 89 aa4.16□□□□□ -1.74
SPG11-213ENST00000558988 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
SPG11-213ENST00000558988 C9orf153Q5TBE3 101 aa4.16□□□□□ -1.74
SPG11-213ENST00000558988 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
SPG11-213ENST00000558988 SLC7A5P1Q8MH63 180 aa4.15□□□□□ -1.75
SPG11-213ENST00000558988 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
SPG11-213ENST00000558988 TRAV23DV6A0A075B6W5 121 aa4.14□□□□□ -1.75
SPG11-213ENST00000558988 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
SPG11-213ENST00000558988 Q6ZRX8 168 aa4.14□□□□□ -1.75
SPG11-213ENST00000558988 Q9BRP9 147 aa4.14□□□□□ -1.75
SPG11-213ENST00000558988 TRBV10-2A0A0K0K1G8 114 aa4.13□□□□□ -1.75
SPG11-213ENST00000558988 NMUP48645 174 aa4.13□□□□□ -1.75
SPG11-213ENST00000558988 SEC61GP60059 68 aa4.13□□□□□ -1.75
SPG11-213ENST00000558988 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
SPG11-213ENST00000558988 FP248Q71RG6 208 aaPredicted RBP4.13□□□□□ -1.75
SPG11-213ENST00000558988 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
SPG11-213ENST00000558988 A0A0J9YXY3 114 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 ZNF73O43830 326 aaPredicted RBP4.12□□□□□ -1.75
SPG11-213ENST00000558988 SPINK1P00995 79 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 HRCT1Q6UXD1 115 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 Q6ZVQ6 151 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 ST20-AS1Q8NBB2 130 aa4.12□□□□□ -1.75
SPG11-213ENST00000558988 COLCA2A8K830 154 aa4.11□□□□□ -1.75
SPG11-213ENST00000558988 IGLV6-57P01721 117 aa4.11□□□□□ -1.75
SPG11-213ENST00000558988 CTAG1AP78358 180 aa4.11□□□□□ -1.75
SPG11-213ENST00000558988 JOSD1Q15040 202 aaPredicted RBP4.11□□□□□ -1.75
SPG11-213ENST00000558988 LOC107984156A0A0G2JMH3 177 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 E9PLD3 99 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 NDUFC2O95298 119 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 HINT1P49773 126 aaPredicted RBP4.1□□□□□ -1.75
SPG11-213ENST00000558988 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 ARL17AQ8IVW1 177 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
SPG11-213ENST00000558988 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
SPG11-213ENST00000558988 SYS1-DBNDD2H3BUS1 97 aa4.09□□□□□ -1.75
SPG11-213ENST00000558988 SLC25A20O43772 301 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms