RNA–Protein interactions for RNA: ENST00000558955.2

PKNOX1-208, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-208ENST00000558955 PRR4Q16378 134 aa7.29□□□□□ -1.24
PKNOX1-208ENST00000558955 C3orf22Q8N5N4 141 aa7.29□□□□□ -1.24
PKNOX1-208ENST00000558955 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
PKNOX1-208ENST00000558955 SPANXB1Q9NS25 103 aaPredicted RBP7.29□□□□□ -1.24
PKNOX1-208ENST00000558955 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
PKNOX1-208ENST00000558955 LITAFQ99732 161 aa7.28□□□□□ -1.24
PKNOX1-208ENST00000558955 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
PKNOX1-208ENST00000558955 B5MCH6 92 aa7.27□□□□□ -1.25
PKNOX1-208ENST00000558955 IGLV6-57P01721 117 aa7.27□□□□□ -1.25
PKNOX1-208ENST00000558955 S100A12P80511 92 aa7.27□□□□□ -1.25
PKNOX1-208ENST00000558955 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
PKNOX1-208ENST00000558955 S100A1P23297 94 aa7.26□□□□□ -1.25
PKNOX1-208ENST00000558955 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
PKNOX1-208ENST00000558955 ATOH7Q8N100 152 aa7.26□□□□□ -1.25
PKNOX1-208ENST00000558955 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
PKNOX1-208ENST00000558955 TIMM17BO60830 172 aa7.25□□□□□ -1.25
PKNOX1-208ENST00000558955 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
PKNOX1-208ENST00000558955 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
PKNOX1-208ENST00000558955 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
PKNOX1-208ENST00000558955 ZNF706Q9Y5V0 76 aaPredicted RBP7.25□□□□□ -1.25
PKNOX1-208ENST00000558955 C20orf202A1L168 122 aa7.24□□□□□ -1.25
PKNOX1-208ENST00000558955 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
PKNOX1-208ENST00000558955 Q9BRP9 147 aa7.24□□□□□ -1.25
PKNOX1-208ENST00000558955 TRAV23DV6A0A075B6W5 121 aa7.23□□□□□ -1.25
PKNOX1-208ENST00000558955 Q6ZRX8 168 aa7.23□□□□□ -1.25
PKNOX1-208ENST00000558955 RETNLBQ9BQ08 111 aa7.22□□□□□ -1.25
PKNOX1-208ENST00000558955 SPANXCQ9NY87 97 aa7.22□□□□□ -1.25
PKNOX1-208ENST00000558955 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
PKNOX1-208ENST00000558955 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
PKNOX1-208ENST00000558955 GAGE2AQ6NT46 116 aa7.21□□□□□ -1.26
PKNOX1-208ENST00000558955 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.26
PKNOX1-208ENST00000558955 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
PKNOX1-208ENST00000558955 SCGB1D4Q6XE38 83 aa7.2□□□□□ -1.26
PKNOX1-208ENST00000558955 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
PKNOX1-208ENST00000558955 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
PKNOX1-208ENST00000558955 HIST1H2BLQ99880 126 aa7.19□□□□□ -1.26
PKNOX1-208ENST00000558955 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
PKNOX1-208ENST00000558955 S100A2P29034 98 aa7.18□□□□□ -1.26
PKNOX1-208ENST00000558955 Q8NBF4 154 aa7.18□□□□□ -1.26
PKNOX1-208ENST00000558955 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
PKNOX1-208ENST00000558955 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
PKNOX1-208ENST00000558955 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 AKR1D1P51857 326 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 CTAG1AP78358 180 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 SPAG11AQ6PDA7 123 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 ST20-AS1Q8NBB2 130 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 KRTAP4-12Q9BQ66 201 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 CBY1Q9Y3M2 126 aa7.16□□□□□ -1.26
PKNOX1-208ENST00000558955 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
PKNOX1-208ENST00000558955 MOBPQ13875 183 aa7.15□□□□□ -1.26
PKNOX1-208ENST00000558955 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
PKNOX1-208ENST00000558955 S100A6P06703 90 aa7.14□□□□□ -1.27
PKNOX1-208ENST00000558955 MUSTN1Q8IVN3 82 aa7.14□□□□□ -1.27
PKNOX1-208ENST00000558955 IFITM1P13164 125 aa7.13□□□□□ -1.27
PKNOX1-208ENST00000558955 SNRPEP62304 92 aaKnown RBP7.13□□□□□ -1.27
PKNOX1-208ENST00000558955 C6orf99Q4VX62 202 aa7.13□□□□□ -1.27
PKNOX1-208ENST00000558955 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
PKNOX1-208ENST00000558955 Q6ZVH6 145 aa7.12□□□□□ -1.27
PKNOX1-208ENST00000558955 COPS9Q8WXC6 57 aa7.12□□□□□ -1.27
PKNOX1-208ENST00000558955 COX7BP24311 80 aa7.11□□□□□ -1.27
PKNOX1-208ENST00000558955 ELOF1P60002 83 aaKnown RBP7.11□□□□□ -1.27
PKNOX1-208ENST00000558955 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
PKNOX1-208ENST00000558955 A6NDN8 102 aa7.1□□□□□ -1.27
PKNOX1-208ENST00000558955 C5orf52A6NGY3 159 aa7.1□□□□□ -1.27
PKNOX1-208ENST00000558955 HSBP1L1C9JCN9 74 aa7.1□□□□□ -1.27
PKNOX1-208ENST00000558955 SPINK1P00995 79 aa7.1□□□□□ -1.27
PKNOX1-208ENST00000558955 DHRS4-AS1Q9P1J3 65 aa7.1□□□□□ -1.27
PKNOX1-208ENST00000558955 C9orf153Q5TBE3 101 aa7.09□□□□□ -1.27
PKNOX1-208ENST00000558955 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
PKNOX1-208ENST00000558955 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
PKNOX1-208ENST00000558955 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
PKNOX1-208ENST00000558955 SCGB1D1O95968 90 aa7.07□□□□□ -1.28
PKNOX1-208ENST00000558955 SPRR1BP22528 89 aa7.07□□□□□ -1.28
PKNOX1-208ENST00000558955 TRBV7-6A0A0J9YX20 115 aa7.06□□□□□ -1.28
PKNOX1-208ENST00000558955 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
PKNOX1-208ENST00000558955 TRAV13-2A0A0B4J235 113 aa7.05□□□□□ -1.28
PKNOX1-208ENST00000558955 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
PKNOX1-208ENST00000558955 Q8N377 158 aa7.05□□□□□ -1.28
PKNOX1-208ENST00000558955 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
PKNOX1-208ENST00000558955 SMIM11BQ8TCY0 68 aa7.05□□□□□ -1.28
PKNOX1-208ENST00000558955 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
PKNOX1-208ENST00000558955 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
PKNOX1-208ENST00000558955 TAL2Q16559 108 aa7.04□□□□□ -1.28
PKNOX1-208ENST00000558955 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
PKNOX1-208ENST00000558955 A4D1N5 150 aa7.03□□□□□ -1.28
PKNOX1-208ENST00000558955 SLC25A34Q6PIV7 304 aa7.03□□□□□ -1.28
PKNOX1-208ENST00000558955 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
PKNOX1-208ENST00000558955 Q1RN00 199 aa7.02□□□□□ -1.29
PKNOX1-208ENST00000558955 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
PKNOX1-208ENST00000558955 COX8AP10176 69 aa7.01□□□□□ -1.29
PKNOX1-208ENST00000558955 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
PKNOX1-208ENST00000558955 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
PKNOX1-208ENST00000558955 HRCT1Q6UXD1 115 aa7.01□□□□□ -1.29
PKNOX1-208ENST00000558955 SLC25A20O43772 301 aa7□□□□□ -1.29
PKNOX1-208ENST00000558955 SMIM29Q86T20 159 aa7□□□□□ -1.29
PKNOX1-208ENST00000558955 MUC2Q02817 5179 aa6.99□□□□□ -1.29
PKNOX1-208ENST00000558955 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
PKNOX1-208ENST00000558955 HIST1H4GQ99525 98 aa6.99□□□□□ -1.29
PKNOX1-208ENST00000558955 C12orf57Q99622 126 aa6.99□□□□□ -1.29
PKNOX1-208ENST00000558955 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms