RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 MPLKIPQ8TAP9 179 aa3.6□□□□□ -1.83
CHRNA3-203ENST00000558903 SPANXB1Q9NS25 103 aaPredicted RBP3.6□□□□□ -1.83
CHRNA3-203ENST00000558903 C5orf52A6NGY3 159 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 TSTD3H0UI37 97 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 H0Y9J4 135 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 VAMP8Q9BV40 100 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 TMEM126AQ9H061 195 aa3.59□□□□□ -1.83
CHRNA3-203ENST00000558903 FAT1Q14517 4588 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 IGLV1-50A0A075B6I6 118 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 ZNF861PO60384 105 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 SPANXCQ9NY87 97 aa3.58□□□□□ -1.84
CHRNA3-203ENST00000558903 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 TRBV10-3A0A0K0K1G6 114 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 TRBV10-2A0A0K0K1G8 114 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 NDUFC2O95298 119 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 PRLHP81277 87 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 Q6ZVH6 145 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 PCP2Q8IVA1 136 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 SPANXDQ9BXN6 97 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 PAM16Q9Y3D7 125 aa3.57□□□□□ -1.84
CHRNA3-203ENST00000558903 A6NDN8 102 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 IFITM1P13164 125 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 JOSD1Q15040 202 aaPredicted RBP3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 Q8NDZ9 215 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 ZNF706Q9Y5V0 76 aaPredicted RBP3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 PKHD1L1Q86WI1 4243 aa3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 SRRM2Q9UQ35 2752 aaKnown RBP3.56□□□□□ -1.84
CHRNA3-203ENST00000558903 HERC1Q15751 4861 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 A0A1B0GV72 72 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 SOSTDC1Q6X4U4 206 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
CHRNA3-203ENST00000558903 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 M0R143 59 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 COX8AP10176 69 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 SLC25A34Q6PIV7 304 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 MUSTN1Q8IVN3 82 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 LINC01600Q96MT4 127 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 LITAFQ99732 161 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 KCNQ1DNQ9H478 68 aa3.54□□□□□ -1.84
CHRNA3-203ENST00000558903 TRAV13-2A0A0B4J235 113 aa3.53□□□□□ -1.84
CHRNA3-203ENST00000558903 ZNF73O43830 326 aaPredicted RBP3.53□□□□□ -1.84
CHRNA3-203ENST00000558903 SCGB1A1P11684 91 aa3.53□□□□□ -1.84
CHRNA3-203ENST00000558903 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 CRYGAP11844 174 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 COX7BP24311 80 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 Q6ZRX8 168 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 PRR26Q8N8Z3 221 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 RAB37Q96AX2 223 aa3.52□□□□□ -1.85
CHRNA3-203ENST00000558903 VAMP3Q15836 100 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 Q1RN00 199 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 PYY3Q5JQD4 70 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 PPDPFQ9H3Y8 114 aa3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 NHP2Q9NX24 153 aaKnown RBP3.51□□□□□ -1.85
CHRNA3-203ENST00000558903 DMBT1Q9UGM3 2413 aaPredicted RBP3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 H7C2G1 150 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 SLC25A20O43772 301 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 SPRR1AP35321 89 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 SNHG12Q9BXW3 62 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 PRO1933Q9H354 126 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 DHRS4-AS1Q9P1J3 65 aa3.5□□□□□ -1.85
CHRNA3-203ENST00000558903 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 SNCGO76070 127 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 C9orf153Q5TBE3 101 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 MTURNQ8N3F0 131 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 SPRR4Q96PI1 79 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 HIGD1BQ9P298 99 aa3.49□□□□□ -1.85
CHRNA3-203ENST00000558903 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
CHRNA3-203ENST00000558903 IGLV9-49A0A0B4J1Y8 123 aa3.48□□□□□ -1.85
CHRNA3-203ENST00000558903 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
CHRNA3-203ENST00000558903 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
CHRNA3-203ENST00000558903 TAL2Q16559 108 aa3.48□□□□□ -1.85
CHRNA3-203ENST00000558903 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms