RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
SPG11-212ENST00000558790 MT1HP80294 61 aa5.32□□□□□ -1.56
SPG11-212ENST00000558790 ETDCA0A1B0GVM5 59 aa5.31□□□□□ -1.56
SPG11-212ENST00000558790 TMEM170BQ5T4T1 132 aa5.31□□□□□ -1.56
SPG11-212ENST00000558790 KCNQ1DNQ9H478 68 aa5.31□□□□□ -1.56
SPG11-212ENST00000558790 SLC25A20O43772 301 aa5.3□□□□□ -1.56
SPG11-212ENST00000558790 PMCHL1Q16048 86 aa5.3□□□□□ -1.56
SPG11-212ENST00000558790 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
SPG11-212ENST00000558790 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
SPG11-212ENST00000558790 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
SPG11-212ENST00000558790 SMIM13P0DJ93 91 aa5.29□□□□□ -1.56
SPG11-212ENST00000558790 HBDP02042 147 aa5.28□□□□□ -1.56
SPG11-212ENST00000558790 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
SPG11-212ENST00000558790 FABP9Q0Z7S8 132 aa5.28□□□□□ -1.56
SPG11-212ENST00000558790 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
SPG11-212ENST00000558790 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 S100PP25815 95 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 MEIG1Q5JSS6 88 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 BAGE3Q86Y29 109 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 Q9BRP9 147 aa5.27□□□□□ -1.57
SPG11-212ENST00000558790 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
SPG11-212ENST00000558790 ATP6V1G1O75348 118 aa5.26□□□□□ -1.57
SPG11-212ENST00000558790 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
SPG11-212ENST00000558790 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
SPG11-212ENST00000558790 LINC00614P0C842 121 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 COX19Q49B96 90 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 PET117Q6UWS5 81 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 Q6ZRX8 168 aa5.25□□□□□ -1.57
SPG11-212ENST00000558790 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
SPG11-212ENST00000558790 SEC11CQ9BY50 192 aa5.24□□□□□ -1.57
SPG11-212ENST00000558790 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
SPG11-212ENST00000558790 TMEM218A2RU14 115 aa5.23□□□□□ -1.57
SPG11-212ENST00000558790 DDTP30046 118 aa5.23□□□□□ -1.57
SPG11-212ENST00000558790 S100A12P80511 92 aa5.23□□□□□ -1.57
SPG11-212ENST00000558790 FAM218AQ96MZ4 157 aa5.23□□□□□ -1.57
SPG11-212ENST00000558790 C5orf52A6NGY3 159 aa5.22□□□□□ -1.57
SPG11-212ENST00000558790 HERV-K104P63124 156 aa5.22□□□□□ -1.57
SPG11-212ENST00000558790 CLLU1Q5K131 121 aa5.22□□□□□ -1.57
SPG11-212ENST00000558790 UQCC3Q6UW78 93 aa5.22□□□□□ -1.57
SPG11-212ENST00000558790 TRAV12-1A0A0B4J245 112 aa5.21□□□□□ -1.58
SPG11-212ENST00000558790 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
SPG11-212ENST00000558790 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.58
SPG11-212ENST00000558790 TRBV10-2A0A0K0K1G8 114 aa5.2□□□□□ -1.58
SPG11-212ENST00000558790 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
SPG11-212ENST00000558790 MAP1LC3CQ9BXW4 147 aa5.2□□□□□ -1.58
SPG11-212ENST00000558790 TRAPPC1Q9Y5R8 145 aa5.2□□□□□ -1.58
SPG11-212ENST00000558790 LOC107984156A0A0G2JMH3 177 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 MYMXA0A1B0GTQ4 84 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 LINC00587B1AMM8 73 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 IGLV6-57P01721 117 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 ARL17AQ8IVW1 177 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 IFI27L1Q96BM0 104 aa5.19□□□□□ -1.58
SPG11-212ENST00000558790 SPANXB1Q9NS25 103 aaPredicted RBP5.19□□□□□ -1.58
SPG11-212ENST00000558790 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 RHEBQ15382 184 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 HRCT1Q6UXD1 115 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 LIMD2Q9BT23 127 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 RPS10P5Q9NQ39 176 aa5.18□□□□□ -1.58
SPG11-212ENST00000558790 M0R2T5 61 aa5.17□□□□□ -1.58
SPG11-212ENST00000558790 JOSD1Q15040 202 aaPredicted RBP5.17□□□□□ -1.58
SPG11-212ENST00000558790 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
SPG11-212ENST00000558790 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
SPG11-212ENST00000558790 MIEN1Q9BRT3 115 aa5.16□□□□□ -1.58
SPG11-212ENST00000558790 H0Y8G0 127 aa5.15□□□□□ -1.59
SPG11-212ENST00000558790 NDUFC2O95298 119 aa5.15□□□□□ -1.59
SPG11-212ENST00000558790 C10orf91Q5T1B1 145 aa5.15□□□□□ -1.59
SPG11-212ENST00000558790 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.59
SPG11-212ENST00000558790 LEPROTO15243 131 aa5.14□□□□□ -1.59
SPG11-212ENST00000558790 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
SPG11-212ENST00000558790 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
SPG11-212ENST00000558790 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
SPG11-212ENST00000558790 SPRR1BP22528 89 aa5.13□□□□□ -1.59
SPG11-212ENST00000558790 NPC2P61916 151 aa5.13□□□□□ -1.59
SPG11-212ENST00000558790 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
SPG11-212ENST00000558790 J3QQQ9 107 aa5.12□□□□□ -1.59
SPG11-212ENST00000558790 IFITM2Q01629 132 aa5.12□□□□□ -1.59
SPG11-212ENST00000558790 A4D1N5 150 aa5.11□□□□□ -1.59
SPG11-212ENST00000558790 H7C2G1 150 aa5.11□□□□□ -1.59
SPG11-212ENST00000558790 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
SPG11-212ENST00000558790 SLC25A34Q6PIV7 304 aa5.11□□□□□ -1.59
SPG11-212ENST00000558790 LGALS3P17931 250 aaKnown RBP5.1□□□□□ -1.59
SPG11-212ENST00000558790 PLNP26678 52 aa5.1□□□□□ -1.59
SPG11-212ENST00000558790 NMUP48645 174 aa5.1□□□□□ -1.59
SPG11-212ENST00000558790 Q1RN00 199 aa5.1□□□□□ -1.59
SPG11-212ENST00000558790 LCE1FQ5T754 118 aa5.1□□□□□ -1.59
SPG11-212ENST00000558790 HSBP1O75506 76 aa5.09□□□□□ -1.59
SPG11-212ENST00000558790 HINT1P49773 126 aaPredicted RBP5.09□□□□□ -1.59
SPG11-212ENST00000558790 CD164Q04900 197 aa5.09□□□□□ -1.59
SPG11-212ENST00000558790 PMCHL2Q9BQD1 86 aa5.09□□□□□ -1.59
SPG11-212ENST00000558790 LAMTOR3Q9UHA4 124 aa5.09□□□□□ -1.59
SPG11-212ENST00000558790 A0A0J9YXY3 114 aa5.08□□□□□ -1.6
SPG11-212ENST00000558790 HERVK_113P61574 105 aa5.08□□□□□ -1.6
SPG11-212ENST00000558790 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
SPG11-212ENST00000558790 YPEL4Q96NS1 127 aa5.08□□□□□ -1.6
SPG11-212ENST00000558790 DHRS4-AS1Q9P1J3 65 aa5.08□□□□□ -1.6
SPG11-212ENST00000558790 DPM2O94777 84 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms