RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 TOMM6Q96B49 74 aa2.91□□□□□ -1.94
LRRC28-208ENST00000558771 NAT8Q9UHE5 227 aa2.91□□□□□ -1.94
LRRC28-208ENST00000558771 ERG28Q9UKR5 140 aa2.91□□□□□ -1.94
LRRC28-208ENST00000558771 C9JQL5 133 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 KRTAP4-16G5E9R7 235 aaPredicted RBP2.9□□□□□ -1.95
LRRC28-208ENST00000558771 K7EMI3 77 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 ADCYAP1P18509 176 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 SPRR1AP35321 89 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 COX17Q14061 63 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 ERASQ7Z444 233 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 TCTE3Q8IZS6 198 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 ZNF625Q96I27 306 aaPredicted RBP2.9□□□□□ -1.95
LRRC28-208ENST00000558771 SCGB3A1Q96QR1 104 aa2.9□□□□□ -1.95
LRRC28-208ENST00000558771 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
LRRC28-208ENST00000558771 H0Y8G0 127 aa2.89□□□□□ -1.95
LRRC28-208ENST00000558771 ERC2-IT1O76042 136 aa2.89□□□□□ -1.95
LRRC28-208ENST00000558771 G0S2P27469 103 aa2.89□□□□□ -1.95
LRRC28-208ENST00000558771 CST9LQ9H4G1 147 aa2.89□□□□□ -1.95
LRRC28-208ENST00000558771 NXT2Q9NPJ8 142 aaKnown RBP2.89□□□□□ -1.95
LRRC28-208ENST00000558771 ETDCA0A1B0GVM5 59 aa2.88□□□□□ -1.95
LRRC28-208ENST00000558771 H3BRM9 83 aa2.88□□□□□ -1.95
LRRC28-208ENST00000558771 SMIM6P0DI80 62 aa2.88□□□□□ -1.95
LRRC28-208ENST00000558771 ADAMTSL4-AS1Q5T5F5 129 aa2.88□□□□□ -1.95
LRRC28-208ENST00000558771 KCNQ1DNQ9H478 68 aa2.88□□□□□ -1.95
LRRC28-208ENST00000558771 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
LRRC28-208ENST00000558771 A0A0U1RRA0 63 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 NCR3O14931 201 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 IGLV6-57P01721 117 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 LINC00158P58513 81 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 PMVKQ15126 192 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 CLLU1Q5K131 121 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 C9orf153Q5TBE3 101 aa2.87□□□□□ -1.95
LRRC28-208ENST00000558771 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
LRRC28-208ENST00000558771 TRBV10-3A0A0K0K1G6 114 aa2.86□□□□□ -1.95
LRRC28-208ENST00000558771 KRTAP16-1A8MUX0 517 aa2.86□□□□□ -1.95
LRRC28-208ENST00000558771 IGLC3P0DOY3 106 aa2.86□□□□□ -1.95
LRRC28-208ENST00000558771 ZNF22P17026 224 aaPredicted RBP2.86□□□□□ -1.95
LRRC28-208ENST00000558771 C12orf57Q99622 126 aa2.86□□□□□ -1.95
LRRC28-208ENST00000558771 Q9BRP9 147 aa2.86□□□□□ -1.95
LRRC28-208ENST00000558771 TRAV9-1A0A075B6T8 112 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 PCP4L1A6NKN8 68 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 S100PP25815 95 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
LRRC28-208ENST00000558771 HERV-K104P63124 156 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 PEA15Q15121 130 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 HRCT1Q6UXD1 115 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 BOD1L2Q8IYS8 172 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 LIMD2Q9BT23 127 aa2.85□□□□□ -1.95
LRRC28-208ENST00000558771 LINC01546A6NGU7 62 aa2.84□□□□□ -1.95
LRRC28-208ENST00000558771 LINC01549A6NIU2 74 aa2.84□□□□□ -1.95
LRRC28-208ENST00000558771 Q6Q795 121 aa2.84□□□□□ -1.95
LRRC28-208ENST00000558771 SFTA2Q6UW10 78 aa2.84□□□□□ -1.95
LRRC28-208ENST00000558771 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 LINC00587B1AMM8 73 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 SMIM13P0DJ93 91 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 NDUFA6P56556 154 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 Q6ZRX8 168 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 COMMD7Q86VX2 200 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
LRRC28-208ENST00000558771 C11orf86A6NJI1 115 aa2.82□□□□□ -1.96
LRRC28-208ENST00000558771 DDTP30046 118 aa2.82□□□□□ -1.96
LRRC28-208ENST00000558771 TMEM170BQ5T4T1 132 aa2.82□□□□□ -1.96
LRRC28-208ENST00000558771 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
LRRC28-208ENST00000558771 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
LRRC28-208ENST00000558771 MT-ND4LP03901 98 aa2.81□□□□□ -1.96
LRRC28-208ENST00000558771 MEIG1Q5JSS6 88 aa2.81□□□□□ -1.96
LRRC28-208ENST00000558771 FA2HQ7L5A8 372 aa2.81□□□□□ -1.96
LRRC28-208ENST00000558771 A0A096LNJ9 63 aa2.8□□□□□ -1.96
LRRC28-208ENST00000558771 JOSD1Q15040 202 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-208ENST00000558771 C1orf195Q5TG92 126 aa2.8□□□□□ -1.96
LRRC28-208ENST00000558771 SMCO4Q9NRQ5 59 aa2.8□□□□□ -1.96
LRRC28-208ENST00000558771 TRBV10-2A0A0K0K1G8 114 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 H7C2G1 150 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 MT2AP02795 61 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 SPRR1BP22528 89 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 AKR1D1P51857 326 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 UQCC3Q6UW78 93 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 BAGE3Q86Y29 109 aa2.79□□□□□ -1.96
LRRC28-208ENST00000558771 TRAV23DV6A0A075B6W5 121 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 MT1FP04733 61 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 CD164Q04900 197 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 Q5XG85 94 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 FAM218AQ96MZ4 157 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
LRRC28-208ENST00000558771 LOC107984156A0A0G2JMH3 177 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 ZNF73O43830 326 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-208ENST00000558771 HBDP02042 147 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 LINC00614P0C842 121 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 PMCHL1Q16048 86 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 S100A7L2Q5SY68 101 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 C10orf91Q5T1B1 145 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 Q6ZVQ6 151 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 ARL17AQ8IVW1 177 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
LRRC28-208ENST00000558771 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-208ENST00000558771 C20orf202A1L168 122 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms