RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 FAM30AQ9NZY2 134 aa10.3□□□□□ -0.76
AP4E1-202ENST00000558439 DEFB116Q30KQ4 102 aa10.29□□□□□ -0.76
AP4E1-202ENST00000558439 C22orf24Q9Y442 160 aa10.29□□□□□ -0.76
AP4E1-202ENST00000558439 GVQW2A0A096LPI5 108 aaPredicted RBP10.28□□□□□ -0.76
AP4E1-202ENST00000558439 WFDC13Q8IUB5 93 aa10.28□□□□□ -0.76
AP4E1-202ENST00000558439 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
AP4E1-202ENST00000558439 MRPL55Q7Z7F7 128 aaKnown RBP10.27□□□□□ -0.76
AP4E1-202ENST00000558439 LINC00167Q96N53 147 aa10.27□□□□□ -0.76
AP4E1-202ENST00000558439 FAM168BA1KXE4 195 aa10.27□□□□□ -0.77
AP4E1-202ENST00000558439 PRR4Q16378 134 aa10.27□□□□□ -0.77
AP4E1-202ENST00000558439 PRLHP81277 87 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 C15orf56Q8N910 161 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 H3BNG1 76 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 LOC110117498A0A087WWA1 95 aa10.26□□□□□ -0.77
AP4E1-202ENST00000558439 H0Y9J4 135 aa10.25□□□□□ -0.77
AP4E1-202ENST00000558439 ST20-AS1Q8NBB2 130 aa10.25□□□□□ -0.77
AP4E1-202ENST00000558439 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
AP4E1-202ENST00000558439 REG3GQ6UW15 175 aa10.24□□□□□ -0.77
AP4E1-202ENST00000558439 NDUFS5O43920 106 aa10.23□□□□□ -0.77
AP4E1-202ENST00000558439 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
AP4E1-202ENST00000558439 CXCL6P80162 114 aa10.23□□□□□ -0.77
AP4E1-202ENST00000558439 OBSCN-AS1Q96MR7 158 aa10.22□□□□□ -0.77
AP4E1-202ENST00000558439 MP68P56378 58 aa10.22□□□□□ -0.77
AP4E1-202ENST00000558439 TM2D3Q9BRN9 247 aa10.21□□□□□ -0.77
AP4E1-202ENST00000558439 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
AP4E1-202ENST00000558439 C14orf177Q52M58 125 aa10.2□□□□□ -0.78
AP4E1-202ENST00000558439 B9D2Q9BPU9 175 aa10.19□□□□□ -0.78
AP4E1-202ENST00000558439 PRYO14603 147 aa10.19□□□□□ -0.78
AP4E1-202ENST00000558439 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
AP4E1-202ENST00000558439 A0A087WSZ3 146 aa10.18□□□□□ -0.78
AP4E1-202ENST00000558439 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
AP4E1-202ENST00000558439 VPS13CQ709C8 3753 aa10.18□□□□□ -0.78
AP4E1-202ENST00000558439 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
AP4E1-202ENST00000558439 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
AP4E1-202ENST00000558439 NDUFB1O75438 58 aa10.17□□□□□ -0.78
AP4E1-202ENST00000558439 Q6ZRX8 168 aa10.17□□□□□ -0.78
AP4E1-202ENST00000558439 F8WDY8 70 aa10.16□□□□□ -0.78
AP4E1-202ENST00000558439 NDUFC1O43677 76 aa10.15□□□□□ -0.78
AP4E1-202ENST00000558439 DNAH10OSP0CZ25 163 aa10.15□□□□□ -0.78
AP4E1-202ENST00000558439 VWFP04275 2813 aa10.14□□□□□ -0.79
AP4E1-202ENST00000558439 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
AP4E1-202ENST00000558439 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
AP4E1-202ENST00000558439 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
AP4E1-202ENST00000558439 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
AP4E1-202ENST00000558439 SMIM29Q86T20 159 aa10.13□□□□□ -0.79
AP4E1-202ENST00000558439 BRK1Q8WUW1 75 aa10.13□□□□□ -0.79
AP4E1-202ENST00000558439 Q9BRP9 147 aa10.13□□□□□ -0.79
AP4E1-202ENST00000558439 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
AP4E1-202ENST00000558439 TENM4Q6N022 2769 aa10.12□□□□□ -0.79
AP4E1-202ENST00000558439 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
AP4E1-202ENST00000558439 Q8N377 158 aa10.11□□□□□ -0.79
AP4E1-202ENST00000558439 KCNQ1DNQ9H478 68 aa10.11□□□□□ -0.79
AP4E1-202ENST00000558439 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
AP4E1-202ENST00000558439 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
AP4E1-202ENST00000558439 CYSTM1Q9H1C7 97 aa10.1□□□□□ -0.79
AP4E1-202ENST00000558439 ZFHX3Q15911 3703 aa10.1□□□□□ -0.79
AP4E1-202ENST00000558439 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
AP4E1-202ENST00000558439 Q8NBF4 154 aa10.08□□□□□ -0.8
AP4E1-202ENST00000558439 NBPF19A0A087WUL8 3843 aa10.07□□□□□ -0.8
AP4E1-202ENST00000558439 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
AP4E1-202ENST00000558439 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
AP4E1-202ENST00000558439 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
AP4E1-202ENST00000558439 LINC00476Q8WZB0 136 aa10.07□□□□□ -0.8
AP4E1-202ENST00000558439 LINC00208Q96KT6 92 aa10.06□□□□□ -0.8
AP4E1-202ENST00000558439 SMIM26A0A096LP01 95 aa10.06□□□□□ -0.8
AP4E1-202ENST00000558439 K7EIL1 84 aa10.06□□□□□ -0.8
AP4E1-202ENST00000558439 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
AP4E1-202ENST00000558439 RPS28P62857 69 aaKnown RBP10.05□□□□□ -0.8
AP4E1-202ENST00000558439 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
AP4E1-202ENST00000558439 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
AP4E1-202ENST00000558439 BCE1O60756 84 aa10.02□□□□□ -0.81
AP4E1-202ENST00000558439 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
AP4E1-202ENST00000558439 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
AP4E1-202ENST00000558439 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
AP4E1-202ENST00000558439 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
AP4E1-202ENST00000558439 KMT2BQ9UMN6 2715 aaPredicted RBP10□□□□□ -0.81
AP4E1-202ENST00000558439 IGKV4-1P06312 121 aa10□□□□□ -0.81
AP4E1-202ENST00000558439 K7EQZ3 153 aa9.99□□□□□ -0.81
AP4E1-202ENST00000558439 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
AP4E1-202ENST00000558439 A0A1W2PNM2 257 aa9.99□□□□□ -0.81
AP4E1-202ENST00000558439 H7BZZ5 65 aa9.99□□□□□ -0.81
AP4E1-202ENST00000558439 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
AP4E1-202ENST00000558439 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
AP4E1-202ENST00000558439 EPM2AB3EWF7 344 aa9.98□□□□□ -0.81
AP4E1-202ENST00000558439 WIPF1O43516 503 aa9.97□□□□□ -0.81
AP4E1-202ENST00000558439 MDFIQ99750 246 aa9.97□□□□□ -0.81
AP4E1-202ENST00000558439 PDZD2O15018 2839 aa9.97□□□□□ -0.81
AP4E1-202ENST00000558439 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.81
AP4E1-202ENST00000558439 KRTAP26-1Q6PEX3 210 aa9.96□□□□□ -0.82
AP4E1-202ENST00000558439 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
AP4E1-202ENST00000558439 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
AP4E1-202ENST00000558439 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
AP4E1-202ENST00000558439 LY6G6CO95867 125 aa9.93□□□□□ -0.82
AP4E1-202ENST00000558439 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
AP4E1-202ENST00000558439 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
AP4E1-202ENST00000558439 FBN1P35555 2871 aaKnown RBP9.91□□□□□ -0.82
AP4E1-202ENST00000558439 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms