RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
TSPAN3-204ENST00000558394 MYMXA0A1B0GTQ4 84 aa9.49□□□□□ -0.89
TSPAN3-204ENST00000558394 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
TSPAN3-204ENST00000558394 MIEN1Q9BRT3 115 aa9.48□□□□□ -0.89
TSPAN3-204ENST00000558394 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
TSPAN3-204ENST00000558394 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
TSPAN3-204ENST00000558394 HINT1P49773 126 aaPredicted RBP9.47□□□□□ -0.89
TSPAN3-204ENST00000558394 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
TSPAN3-204ENST00000558394 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
TSPAN3-204ENST00000558394 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
TSPAN3-204ENST00000558394 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
TSPAN3-204ENST00000558394 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
TSPAN3-204ENST00000558394 HSBP1O75506 76 aa9.44□□□□□ -0.9
TSPAN3-204ENST00000558394 Q6Q795 121 aa9.44□□□□□ -0.9
TSPAN3-204ENST00000558394 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
TSPAN3-204ENST00000558394 CFC1P0CG37 223 aa9.43□□□□□ -0.9
TSPAN3-204ENST00000558394 H0Y8G0 127 aa9.42□□□□□ -0.9
TSPAN3-204ENST00000558394 CD164Q04900 197 aa9.41□□□□□ -0.9
TSPAN3-204ENST00000558394 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
TSPAN3-204ENST00000558394 H7C2G1 150 aa9.4□□□□□ -0.9
TSPAN3-204ENST00000558394 SPRR1BP22528 89 aa9.4□□□□□ -0.9
TSPAN3-204ENST00000558394 NDUFC2O95298 119 aa9.39□□□□□ -0.91
TSPAN3-204ENST00000558394 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
TSPAN3-204ENST00000558394 SSPOA2VEC9 5147 aa9.39□□□□□ -0.91
TSPAN3-204ENST00000558394 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
TSPAN3-204ENST00000558394 LEPROTO15243 131 aa9.36□□□□□ -0.91
TSPAN3-204ENST00000558394 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
TSPAN3-204ENST00000558394 PLNP26678 52 aa9.36□□□□□ -0.91
TSPAN3-204ENST00000558394 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
TSPAN3-204ENST00000558394 DHRS4-AS1Q9P1J3 65 aa9.36□□□□□ -0.91
TSPAN3-204ENST00000558394 USH2AO75445 5202 aa9.35□□□□□ -0.91
TSPAN3-204ENST00000558394 SERF1AO75920 110 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 TRGC2P03986 189 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 LINC00310P59036 64 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 HERVK_113P61574 105 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 Q1RN00 199 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 Q5XG85 94 aa9.34□□□□□ -0.91
TSPAN3-204ENST00000558394 J3QQQ9 107 aa9.33□□□□□ -0.92
TSPAN3-204ENST00000558394 TAL2Q16559 108 aa9.33□□□□□ -0.92
TSPAN3-204ENST00000558394 NMUP48645 174 aa9.32□□□□□ -0.92
TSPAN3-204ENST00000558394 DPM2O94777 84 aa9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 AKR1D1P51857 326 aa9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 NPC2P61916 151 aa9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 DEFB105AQ8NG35 78 aa9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 HSPB8Q9UJY1 196 aa9.31□□□□□ -0.92
TSPAN3-204ENST00000558394 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
TSPAN3-204ENST00000558394 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
TSPAN3-204ENST00000558394 IGKCP01834 107 aa9.29□□□□□ -0.92
TSPAN3-204ENST00000558394 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
TSPAN3-204ENST00000558394 FABP4P15090 132 aa9.28□□□□□ -0.92
TSPAN3-204ENST00000558394 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
TSPAN3-204ENST00000558394 TEX49A0A1B0GTD5 131 aa9.26□□□□□ -0.93
TSPAN3-204ENST00000558394 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
TSPAN3-204ENST00000558394 FCGBPQ9Y6R7 5405 aaPredicted RBP9.25□□□□□ -0.93
TSPAN3-204ENST00000558394 TCL1BO95988 128 aa9.25□□□□□ -0.93
TSPAN3-204ENST00000558394 SOSTDC1Q6X4U4 206 aa9.25□□□□□ -0.93
TSPAN3-204ENST00000558394 COX7BP24311 80 aa9.24□□□□□ -0.93
TSPAN3-204ENST00000558394 A0A0J9YXY3 114 aa9.23□□□□□ -0.93
TSPAN3-204ENST00000558394 C20orf202A1L168 122 aa9.22□□□□□ -0.93
TSPAN3-204ENST00000558394 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
TSPAN3-204ENST00000558394 E9PLD3 99 aa9.21□□□□□ -0.94
TSPAN3-204ENST00000558394 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
TSPAN3-204ENST00000558394 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.94
TSPAN3-204ENST00000558394 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
TSPAN3-204ENST00000558394 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
TSPAN3-204ENST00000558394 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
TSPAN3-204ENST00000558394 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
TSPAN3-204ENST00000558394 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
TSPAN3-204ENST00000558394 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
TSPAN3-204ENST00000558394 PCP2Q8IVA1 136 aa9.19□□□□□ -0.94
TSPAN3-204ENST00000558394 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
TSPAN3-204ENST00000558394 COLCA2A8K830 154 aa9.17□□□□□ -0.94
TSPAN3-204ENST00000558394 Q75L30 129 aa9.16□□□□□ -0.94
TSPAN3-204ENST00000558394 TRBV20-1A0A075B6N2 111 aa9.15□□□□□ -0.94
TSPAN3-204ENST00000558394 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
TSPAN3-204ENST00000558394 LITAFQ99732 161 aa9.15□□□□□ -0.94
TSPAN3-204ENST00000558394 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
TSPAN3-204ENST00000558394 OBSCN-AS1Q96MR7 158 aa9.14□□□□□ -0.95
TSPAN3-204ENST00000558394 TIMM17BO60830 172 aa9.13□□□□□ -0.95
TSPAN3-204ENST00000558394 SLC7A5P1Q8MH63 180 aa9.12□□□□□ -0.95
TSPAN3-204ENST00000558394 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
TSPAN3-204ENST00000558394 LINC00518Q8N0U6 118 aa9.11□□□□□ -0.95
TSPAN3-204ENST00000558394 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
TSPAN3-204ENST00000558394 LINC01545Q5VT33 79 aa9.1□□□□□ -0.95
TSPAN3-204ENST00000558394 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
TSPAN3-204ENST00000558394 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BKO60814 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BJP06899 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BOP23527 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BHQ93079 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BNQ99877 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 HIST1H2BMQ99879 126 aa9.09□□□□□ -0.95
TSPAN3-204ENST00000558394 F8WEM9 126 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms