RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
NEDD1-213ENST00000557644 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
NEDD1-213ENST00000557644 TRAV13-2A0A0B4J235 113 aa9.3□□□□□ -0.92
NEDD1-213ENST00000557644 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
NEDD1-213ENST00000557644 CFC1P0CG37 223 aa9.3□□□□□ -0.92
NEDD1-213ENST00000557644 UBE2AP49459 152 aa9.3□□□□□ -0.92
NEDD1-213ENST00000557644 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
NEDD1-213ENST00000557644 ZNF861PO60384 105 aa9.29□□□□□ -0.92
NEDD1-213ENST00000557644 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
NEDD1-213ENST00000557644 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
NEDD1-213ENST00000557644 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
NEDD1-213ENST00000557644 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
NEDD1-213ENST00000557644 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
NEDD1-213ENST00000557644 CTAG1AP78358 180 aa9.27□□□□□ -0.93
NEDD1-213ENST00000557644 SPINK6Q6UWN8 80 aa9.27□□□□□ -0.93
NEDD1-213ENST00000557644 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
NEDD1-213ENST00000557644 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
NEDD1-213ENST00000557644 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
NEDD1-213ENST00000557644 B5MCH6 92 aa9.26□□□□□ -0.93
NEDD1-213ENST00000557644 C6orf99Q4VX62 202 aa9.26□□□□□ -0.93
NEDD1-213ENST00000557644 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
NEDD1-213ENST00000557644 TMEM238LA0A1B0GVL6 79 aa9.25□□□□□ -0.93
NEDD1-213ENST00000557644 A6NJY4 79 aa9.25□□□□□ -0.93
NEDD1-213ENST00000557644 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
NEDD1-213ENST00000557644 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
NEDD1-213ENST00000557644 A0A0B4J2C4 111 aa9.24□□□□□ -0.93
NEDD1-213ENST00000557644 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
NEDD1-213ENST00000557644 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
NEDD1-213ENST00000557644 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
NEDD1-213ENST00000557644 CBY1Q9Y3M2 126 aa9.24□□□□□ -0.93
NEDD1-213ENST00000557644 H0Y9J4 135 aa9.23□□□□□ -0.93
NEDD1-213ENST00000557644 H7C2G1 150 aa9.23□□□□□ -0.93
NEDD1-213ENST00000557644 K7ERJ3 54 aa9.23□□□□□ -0.93
NEDD1-213ENST00000557644 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
NEDD1-213ENST00000557644 Q6ZRX8 168 aa9.23□□□□□ -0.93
NEDD1-213ENST00000557644 Q9BRP9 147 aa9.22□□□□□ -0.93
NEDD1-213ENST00000557644 SMCR5Q8TEV8 140 aa9.21□□□□□ -0.93
NEDD1-213ENST00000557644 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
NEDD1-213ENST00000557644 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
NEDD1-213ENST00000557644 ERC2-IT1O76042 136 aa9.19□□□□□ -0.94
NEDD1-213ENST00000557644 COX7BP24311 80 aa9.19□□□□□ -0.94
NEDD1-213ENST00000557644 ELOF1P60002 83 aaKnown RBP9.19□□□□□ -0.94
NEDD1-213ENST00000557644 A0A1B0GWB2 263 aa9.18□□□□□ -0.94
NEDD1-213ENST00000557644 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
NEDD1-213ENST00000557644 M0R143 59 aa9.16□□□□□ -0.94
NEDD1-213ENST00000557644 Q1RN00 199 aa9.16□□□□□ -0.94
NEDD1-213ENST00000557644 TRBV7-6A0A0J9YX20 115 aa9.16□□□□□ -0.94
NEDD1-213ENST00000557644 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
NEDD1-213ENST00000557644 BATFQ16520 125 aa9.14□□□□□ -0.95
NEDD1-213ENST00000557644 TSPAN13O95857 204 aa9.12□□□□□ -0.95
NEDD1-213ENST00000557644 VAMP3Q15836 100 aa9.12□□□□□ -0.95
NEDD1-213ENST00000557644 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
NEDD1-213ENST00000557644 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
NEDD1-213ENST00000557644 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
NEDD1-213ENST00000557644 TRIAP1O43715 76 aa9.11□□□□□ -0.95
NEDD1-213ENST00000557644 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
NEDD1-213ENST00000557644 TNXBP22105 4242 aa9.1□□□□□ -0.95
NEDD1-213ENST00000557644 A0A087X002 238 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-213ENST00000557644 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 PCP4L1A6NKN8 68 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 OXTP01178 125 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 GAGE2AQ6NT46 116 aa9.09□□□□□ -0.95
NEDD1-213ENST00000557644 PSMB2P49721 201 aa9.08□□□□□ -0.96
NEDD1-213ENST00000557644 ZNF706Q9Y5V0 76 aaPredicted RBP9.08□□□□□ -0.96
NEDD1-213ENST00000557644 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
NEDD1-213ENST00000557644 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
NEDD1-213ENST00000557644 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
NEDD1-213ENST00000557644 hADV29S1A0JD25 119 aa9.06□□□□□ -0.96
NEDD1-213ENST00000557644 SLC25A20O43772 301 aa9.06□□□□□ -0.96
NEDD1-213ENST00000557644 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
NEDD1-213ENST00000557644 SNHG12Q9BXW3 62 aa9.05□□□□□ -0.96
NEDD1-213ENST00000557644 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-213ENST00000557644 H0YGX0 51 aa9.05□□□□□ -0.96
NEDD1-213ENST00000557644 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
NEDD1-213ENST00000557644 CRYGAP11844 174 aa9.04□□□□□ -0.96
NEDD1-213ENST00000557644 KRTAP10-8P60410 259 aa9.04□□□□□ -0.96
NEDD1-213ENST00000557644 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
NEDD1-213ENST00000557644 CLEC2BQ92478 149 aa9.04□□□□□ -0.96
NEDD1-213ENST00000557644 J3QL48 77 aa9.04□□□□□ -0.96
NEDD1-213ENST00000557644 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
NEDD1-213ENST00000557644 Q6ZQY7 126 aa9.02□□□□□ -0.96
NEDD1-213ENST00000557644 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
NEDD1-213ENST00000557644 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.97
NEDD1-213ENST00000557644 COX6CP09669 75 aa9.01□□□□□ -0.97
NEDD1-213ENST00000557644 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
NEDD1-213ENST00000557644 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
NEDD1-213ENST00000557644 SPRR1BP22528 89 aa8.99□□□□□ -0.97
NEDD1-213ENST00000557644 Q8N377 158 aa8.99□□□□□ -0.97
NEDD1-213ENST00000557644 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
NEDD1-213ENST00000557644 TEX49A0A1B0GTD5 131 aa8.98□□□□□ -0.97
NEDD1-213ENST00000557644 TAX1BP3O14907 124 aa8.98□□□□□ -0.97
NEDD1-213ENST00000557644 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
NEDD1-213ENST00000557644 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
NEDD1-213ENST00000557644 H3BUT2 72 aa8.97□□□□□ -0.97
NEDD1-213ENST00000557644 HERC1Q15751 4861 aa8.96□□□□□ -0.97
NEDD1-213ENST00000557644 SMIM29Q86T20 159 aa8.96□□□□□ -0.98
NEDD1-213ENST00000557644 A0A1B0GX51 115 aa8.95□□□□□ -0.98
NEDD1-213ENST00000557644 SNCGO76070 127 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms