RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SNRPD3P62318 126 aaKnown RBP2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 FOXI2Q6ZQN5 318 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 CYP2G1PQ6ZSU1 146 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 OR4B1Q8NGF8 309 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 PRELID3AQ96N28 172 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 ODF3Q96PU9 254 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 NMES1Q9C002 83 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 NPVFQ9HCQ7 196 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 NIT2Q9NQR4 276 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 HIGD1AQ9Y241 93 aa2.18□□□□□ -2.06
MTHFD1-216ENST00000557539 TRBV27A0A0K0K1C4 114 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 SSSCA1O60232 199 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 IAPPP10997 89 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 DEFB131AP59861 70 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 TCTE3Q8IZS6 198 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 RAB37Q96AX2 223 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 HYLS1Q96M11 299 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 MGST2Q99735 147 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 PSENENQ9NZ42 101 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 TMEM14CQ9P0S9 112 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 HSPB8Q9UJY1 196 aa2.17□□□□□ -2.06
MTHFD1-216ENST00000557539 TRBV6-5A0A0K0K1A5 114 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 HYPMO75409 117 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 NMBP08949 121 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 PDE6HQ13956 83 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 PSMG4Q5JS54 123 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 GDF5OSQ5U4N7 250 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 FAM167A-AS1Q96KT0 104 aa2.16□□□□□ -2.06
MTHFD1-216ENST00000557539 hDV103S1A0JD37 113 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 F8W036 122 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 H3BQ15 152 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 MPC2O95563 127 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 MT-ND4LP03901 98 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 SPART-AS1P0CW21 52 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 Q5XG85 94 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 PPP1R1CQ8WVI7 109 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 AP1S3Q96PC3 154 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 PFDN5Q99471 154 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 RPRMQ9NS64 109 aa2.15□□□□□ -2.07
MTHFD1-216ENST00000557539 IGKV3-7A0A075B6H7 116 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 RBAKDNA6NC62 111 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 FAM24AA6NFZ4 105 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 H3BNG1 76 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 SLC25A5P05141 298 aaKnown RBP2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 FABP4P15090 132 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 FOXA3P55318 350 aaPredicted RBP2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 ASB16-AS1Q495Z4 193 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 C10orf113Q5VZT2 155 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 ZNF625Q96I27 306 aaPredicted RBP2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 PSMG3Q9BT73 122 aaPredicted RBP2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 SLC35B3Q9H1N7 401 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 LENEPQ9Y5L5 61 aa2.14□□□□□ -2.07
MTHFD1-216ENST00000557539 TRGV2A0A075B6R0 118 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 UBE2L5PA0A1B0GUS4 154 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 TPT1P13693 172 aaKnown RBP2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 DEFB1P60022 68 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 RRAS2P62070 204 aaPredicted RBP2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 TDRG1Q3Y452 100 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 MIC13Q5XKP0 118 aa2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 TMEM263Q8WUH6 116 aaKnown RBP2.13□□□□□ -2.07
MTHFD1-216ENST00000557539 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 SIX6O95475 246 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 FGF7P21781 194 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 S100A10P60903 97 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 SERF2P84101 59 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 SPINK13Q1W4C9 94 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 C1orf137Q5JT78 98 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 Q6AWC8 147 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 C2orf82Q6UX34 121 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 LINC00052Q96N35 136 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 AGPAT4-IT1Q9H0P7 198 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 PAIP2BQ9ULR5 123 aaKnown RBP2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 TNFSF18Q9UNG2 199 aa2.12□□□□□ -2.07
MTHFD1-216ENST00000557539 TRBV6-8A0A0A6YYG3 113 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 M0R2Z0 102 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 M0R3E3 92 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 SPINK4O60575 86 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 PYYP10082 97 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 HIST1H1AQ02539 215 aaPredicted RBP2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 Q5BKY6 102 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 TCEAL7Q9BRU2 100 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 TIMM8BQ9Y5J9 83 aaPredicted RBP2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 ARL2-SNX15V9GYD0 113 aa2.11□□□□□ -2.07
MTHFD1-216ENST00000557539 TRAV12-2A0A075B6T6 113 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 TRBV6-1A0A0K0K1D8 114 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 TCRAP04437 139 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 RNASE3P12724 160 aaKnown RBP2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 TEX261Q6UWH6 196 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 SPINK6Q6UWN8 80 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
MTHFD1-216ENST00000557539 Q8TAT8 98 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms