RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MYO9AB2RTY4 2548 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 ROCK2O75116 1388 aaKnown RBP-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 SAMD9Q5K651 1589 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 MAP3K1Q13233 1512 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 TRAV30A0A087WSZ9 112 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 TRBV7-7A0A0K0K1E9 115 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 SPTY2D1-AS1A0A0U1RR47 76 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 F6UZH7 168 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 COX6CP09669 75 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 ARMS2P0C7Q2 107 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 KRTAP20-1Q3LI63 56 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 C12orf57Q99622 126 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 MYOM2P54296 1465 aa-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 SPTAN1Q13813 2472 aaKnown RBP-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 KTN1Q86UP2 1357 aaKnown RBP-0.57□□□□□ -2.5
FOXN3-216ENST00000557496 PKD1L3Q7Z443 1732 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 MAPKBP1O60336 1514 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 ARHGAP5Q13017 1502 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 PREX1Q8TCU6 1659 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 CCDC141Q6ZP82 1450 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 A0A1B0GV90 55 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 NAP1L6A6NFF2 107 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 FAM24AA6NFZ4 105 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 C9orf92A6NGG3 77 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 CRYM-AS1A6NIL9 109 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 H0YAA0 97 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 H3BQF6 201 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 H7BZZ5 65 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 CCL22O00626 93 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 SNAPC5O75971 98 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 IGLC2P0DOY2 106 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 IGLC3P0DOY3 106 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 ATP5EP56381 51 aaPredicted RBP-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 GNGT1P63211 74 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 DEFA5Q01523 94 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 CCDC58Q4VC31 144 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 S4R3F8 94 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 CLIP1P30622 1438 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 NRKQ7Z2Y5 1582 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 DOT1LQ8TEK3 1739 aa-0.58□□□□□ -2.5
FOXN3-216ENST00000557496 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 PZPP20742 1482 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 MAGI2Q86UL8 1455 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 ITPR2Q14571 2701 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 CFAP46Q8IYW2 2715 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 TRBV25-1A0A075B6N4 114 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 TMEM262E9PQX1 116 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 FAM107BQ9H098 131 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 PSENENQ9NZ42 101 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 PAIP2BQ9ULR5 123 aaKnown RBP-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 IER3IP1Q9Y5U9 82 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 ANKRD50Q9ULJ7 1429 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 SUPT6HQ7KZ85 1726 aaKnown RBP-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 UBR1Q8IWV7 1749 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 ZNF831Q5JPB2 1677 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 MGAQ8IWI9 3026 aa-0.59□□□□□ -2.5
FOXN3-216ENST00000557496 USP32Q8NFA0 1604 aa-0.6□□□□□ -2.5
FOXN3-216ENST00000557496 ALKQ9UM73 1620 aa-0.6□□□□□ -2.5
FOXN3-216ENST00000557496 MLH3Q9UHC1 1453 aa-0.6□□□□□ -2.5
FOXN3-216ENST00000557496 POLR1AO95602 1720 aaPredicted RBP-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 TIAM2Q8IVF5 1701 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 NAIPQ13075 1403 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 CORTO00230 105 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 DLEU1O43261 78 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 MT-ATP8P03928 68 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 COX7BP24311 80 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 PPP3R1P63098 170 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 MT1XP80297 61 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 DEFB110Q30KQ9 67 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 PSMG4Q5JS54 123 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 SVBPQ8N300 66 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 C1orf54Q8WWF1 131 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 TRGV9Q99603 122 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 CGREF1Q99674 301 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 RGPD8O14715 1765 aaPredicted RBP-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 RGPD5Q99666 1765 aa-0.6□□□□□ -2.51
FOXN3-216ENST00000557496 WIZO95785 1651 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 F8WEM9 126 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 H3BQ15 152 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 GNGT2O14610 69 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 S100A1P23297 94 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 DEFB1P60022 68 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 PMCHL1Q16048 86 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 TSC22D3Q99576 134 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 VAMP8Q9BV40 100 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 PRDM15P57071 1507 aaPredicted RBP-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 FAM135AQ9P2D6 1515 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 LTN1O94822 1766 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 NESP48681 1621 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 ANKRD36BQ8N2N9 1353 aa-0.61□□□□□ -2.51
FOXN3-216ENST00000557496 PLXNC1O60486 1568 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 DMXL2Q8TDJ6 3036 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 ANKRD36CQ5JPF3 1778 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 LRRC7Q96NW7 1537 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 LINC00587B1AMM8 73 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 D6R8Y8 96 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 GNG4P50150 75 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 LINC00158P58513 81 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 KRTDAPP60985 99 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms