RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-240ENST00000556339 UPK3BQ9BT76 320 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 HERC1Q15751 4861 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-240ENST00000556339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-240ENST00000556339 TEX49A0A1B0GTD5 131 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 IGKV2-29A2NJV5 120 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-240ENST00000556339 IBA57-AS1B1ANH7 110 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 H7C2G1 150 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 UBE2L6O14933 153 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 FUSP35637 526 aaKnown RBP eCLIP2.63□□□□□ -1.99
ATXN3-240ENST00000556339 SVIPQ8NHG7 77 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 PKD1P98161 4303 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 FAT2Q9NYQ8 4349 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 DNAH11Q96DT5 4516 aa2.63□□□□□ -1.99
ATXN3-240ENST00000556339 IGHV3-64A0A075B6Q5 118 aa2.62□□□□□ -1.99
ATXN3-240ENST00000556339 IGHV3-73A0A0B4J1V6 119 aa2.62□□□□□ -1.99
ATXN3-240ENST00000556339 SMR3BP02814 79 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-240ENST00000556339 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
ATXN3-240ENST00000556339 Q9HAA7 133 aa2.62□□□□□ -1.99
ATXN3-240ENST00000556339 A0A087WTM6 91 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 A0A087WZ39 114 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 IGHV3-38A0A0C4DH36 116 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 NDUFC2O95298 119 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 DNAL4O96015 105 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 CRPP02741 224 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00694P0DN24 101 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 COX6A2Q02221 97 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 COX17Q14061 63 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 WFDC10BQ8IUB3 73 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 COX7B2Q8TF08 81 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 HSPG2P98160 4391 aa2.61□□□□□ -1.99
ATXN3-240ENST00000556339 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
ATXN3-240ENST00000556339 TRBV6-8A0A0A6YYG3 113 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 TRAV13-1A0A0B4J241 112 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 IGHV3OR16-9A0A0B4J2B5 98 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 LOC100131303A0A0U1RQF7 123 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 DNAH10OSP0CZ25 163 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 Q5VSD8 79 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 C5orf38Q86SI9 138 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 Q8IZM0 81 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
ATXN3-240ENST00000556339 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 BCE1O60756 84 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 HAMPP81172 84 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 SS18Q15532 418 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 RNASE13Q5GAN3 156 aaKnown RBP2.59□□□□□ -1.99
ATXN3-240ENST00000556339 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 Q6ZRN7 208 aaPredicted RBP2.59□□□□□ -1.99
ATXN3-240ENST00000556339 DEFB104AQ8WTQ1 72 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 Q9UF83 564 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
ATXN3-240ENST00000556339 A0A087X002 238 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 LINC00158P58513 81 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 C6orf226Q5I0X4 101 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 LINC01556Q5JQF7 62 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 LELP1Q5T871 98 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 Q6JHZ5 121 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 RMI2Q96E14 147 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 LINC00526Q96FQ7 95 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 CHCHD5Q9BSY4 110 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
ATXN3-240ENST00000556339 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.57□□□□□ -2
ATXN3-240ENST00000556339 IGKV2-28A0A075B6P5 120 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 LECT2O14960 151 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 IGKV2D-28P01615 120 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 NPC2P61916 151 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-240ENST00000556339 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-240ENST00000556339 CD164L2Q6UWJ8 174 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 C3orf22Q8N5N4 141 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 LINC00337Q8N6G1 96 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 Q8N814 137 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 SMIM11BQ8TCY0 68 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 DPH3Q96FX2 82 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
ATXN3-240ENST00000556339 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms