RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 EDDM3BP56851 147 aa0.39□□□□□ -2.35
CDKN3-210ENST00000556305 SPTSSBQ8NFR3 76 aa0.39□□□□□ -2.35
CDKN3-210ENST00000556305 COPS9Q8WXC6 57 aa0.39□□□□□ -2.35
CDKN3-210ENST00000556305 Q96NJ1 140 aa0.39□□□□□ -2.35
CDKN3-210ENST00000556305 SDF2Q99470 211 aa0.39□□□□□ -2.35
CDKN3-210ENST00000556305 PIGBOS1A0A0B4J2F0 54 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 FAM92AA1XBS5 289 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 APOC4-APOC2K7ER74 178 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 UBE2D1P51668 147 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 ZNF818PQ6ZRF7 136 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 FOCADQ5VW36 1801 aa0.38□□□□□ -2.35
CDKN3-210ENST00000556305 DOCK1Q14185 1865 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 TRBV10-3A0A0K0K1G6 114 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 TMEM14DPA8MWL7 114 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 SPINK1P00995 79 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 SMIM6P0DI80 62 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 S100A7L2Q5SY68 101 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 TSC22D3Q99576 134 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 PDCD10Q9BUL8 212 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 SEC11CQ9BY50 192 aa0.37□□□□□ -2.35
CDKN3-210ENST00000556305 TRGV1A0A0A0MS02 117 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 FAM25AB3EWG3 89 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 FAM25CB3EWG5 89 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 FAM25GB3EWG6 89 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 STATHP02808 62 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 NMBP08949 121 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 GCHFRP30047 84 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 SELENOWP63302 87 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 Q5BKY6 102 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 Q6ZRX8 168 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 ARL11Q969Q4 196 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 DPH3Q96FX2 82 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 FAM107BQ9H098 131 aa0.36□□□□□ -2.35
CDKN3-210ENST00000556305 HMGN1P05114 100 aa0.35□□□□□ -2.35
CDKN3-210ENST00000556305 UBA52P62987 128 aaKnown RBP0.35□□□□□ -2.35
CDKN3-210ENST00000556305 CCL8P80075 99 aa0.35□□□□□ -2.35
CDKN3-210ENST00000556305 HAMPP81172 84 aa0.35□□□□□ -2.35
CDKN3-210ENST00000556305 INSL4Q14641 139 aa0.35□□□□□ -2.35
CDKN3-210ENST00000556305 FAM213BQ8TBF2 198 aa0.35□□□□□ -2.35
CDKN3-210ENST00000556305 PLIN4Q96Q06 1357 aa0.34□□□□□ -2.35
CDKN3-210ENST00000556305 CLPSL1A2RUU4 121 aa0.33□□□□□ -2.36
CDKN3-210ENST00000556305 NDUFA2O43678 99 aa0.33□□□□□ -2.36
CDKN3-210ENST00000556305 HIST1H1DP16402 221 aaKnown RBP0.33□□□□□ -2.36
CDKN3-210ENST00000556305 WFDC6Q9BQY6 131 aa0.33□□□□□ -2.36
CDKN3-210ENST00000556305 LINC00470Q9BZP3 86 aa0.33□□□□□ -2.36
CDKN3-210ENST00000556305 LINC00312Q9Y6C7 94 aa0.33□□□□□ -2.36
CDKN3-210ENST00000556305 TRAV1-2A0A0B4J238 106 aa0.32□□□□□ -2.36
CDKN3-210ENST00000556305 M0R2T5 61 aa0.32□□□□□ -2.36
CDKN3-210ENST00000556305 C12orf73Q69YU5 71 aa0.32□□□□□ -2.36
CDKN3-210ENST00000556305 U3KQA8 63 aa0.32□□□□□ -2.36
CDKN3-210ENST00000556305 GNG7O60262 68 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 Q5VV11 94 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 BAGE3Q86Y29 109 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 AQP10Q96PS8 301 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 SNRNP25Q9BV90 132 aaKnown RBP0.31□□□□□ -2.36
CDKN3-210ENST00000556305 AGPAT4-IT1Q9H0P7 198 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 RERGLQ9H628 205 aa0.31□□□□□ -2.36
CDKN3-210ENST00000556305 KIF20BQ96Q89 1820 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 TRAV13-2A0A0B4J235 113 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 SIX6O95475 246 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 UBE2DNLQ8IWF7 75 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 FDCSPQ8NFU4 85 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 SERP1Q9Y6X1 66 aa0.3□□□□□ -2.36
CDKN3-210ENST00000556305 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
CDKN3-210ENST00000556305 MT1FP04733 61 aa0.29□□□□□ -2.36
CDKN3-210ENST00000556305 MEIG1Q5JSS6 88 aa0.29□□□□□ -2.36
CDKN3-210ENST00000556305 C1orf54Q8WWF1 131 aa0.29□□□□□ -2.36
CDKN3-210ENST00000556305 NAA60Q9H7X0 242 aa0.29□□□□□ -2.36
CDKN3-210ENST00000556305 K7EP13 123 aa0.28□□□□□ -2.36
CDKN3-210ENST00000556305 MT2AP02795 61 aa0.28□□□□□ -2.36
CDKN3-210ENST00000556305 RBM3P98179 157 aaKnown RBP0.28□□□□□ -2.36
CDKN3-210ENST00000556305 Q6AWC8 147 aa0.28□□□□□ -2.36
CDKN3-210ENST00000556305 Q9Y3F1 56 aa0.28□□□□□ -2.36
CDKN3-210ENST00000556305 PPP1R17O96001 155 aa0.27□□□□□ -2.37
CDKN3-210ENST00000556305 CCL18P55774 89 aa0.27□□□□□ -2.37
CDKN3-210ENST00000556305 R4GMQ9 66 aa0.27□□□□□ -2.37
CDKN3-210ENST00000556305 G3V318 75 aa0.26□□□□□ -2.37
CDKN3-210ENST00000556305 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
CDKN3-210ENST00000556305 CFAP126Q5VTH2 177 aa0.26□□□□□ -2.37
CDKN3-210ENST00000556305 Q8N8P6 123 aa0.26□□□□□ -2.37
CDKN3-210ENST00000556305 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.26□□□□□ -2.37
CDKN3-210ENST00000556305 LSM10Q969L4 123 aaKnown RBP0.26□□□□□ -2.37
CDKN3-210ENST00000556305 TCHHQ07283 1943 aa0.26□□□□□ -2.37
CDKN3-210ENST00000556305 A0A0D9SFI3 127 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 ZNF815PA8K554 130 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 FGF7P21781 194 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 BTG2P78543 158 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 Q56UQ5 140 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 SSBP3-AS1Q7Z2R9 100 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 TTC9CQ8N5M4 171 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 WFDC9Q8NEX5 89 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 NPVFQ9HCQ7 196 aa0.25□□□□□ -2.37
CDKN3-210ENST00000556305 C10orf142B7Z368 130 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 SPINK8P0C7L1 97 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 KRTAP8-1Q8IUC2 63 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 SMIM4Q8WVI0 70 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 PPP3R2Q96LZ3 170 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 LENEPQ9Y5L5 61 aa0.24□□□□□ -2.37
CDKN3-210ENST00000556305 MIF4GDA9UHW6 222 aaKnown RBP0.23□□□□□ -2.37
CDKN3-210ENST00000556305 APOC2P02655 101 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms