RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 AMELXQ99217 191 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
PSEN1-216ENST00000556066 H3BRM9 83 aa4.14□□□□□ -1.75
PSEN1-216ENST00000556066 ZNF22P17026 224 aaPredicted RBP4.14□□□□□ -1.75
PSEN1-216ENST00000556066 C9orf116Q5BN46 136 aaPredicted RBP4.14□□□□□ -1.75
PSEN1-216ENST00000556066 C1orf195Q5TG92 126 aa4.14□□□□□ -1.75
PSEN1-216ENST00000556066 CEND1Q8N111 149 aa4.14□□□□□ -1.75
PSEN1-216ENST00000556066 RAB37Q96AX2 223 aa4.14□□□□□ -1.75
PSEN1-216ENST00000556066 NAA38Q9BRA0 125 aaKnown RBP4.14□□□□□ -1.75
PSEN1-216ENST00000556066 LEPROTO15243 131 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 SMIM13P0DJ93 91 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 HERVK_113P61574 105 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
PSEN1-216ENST00000556066 HIST1H4GQ99525 98 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
PSEN1-216ENST00000556066 IGHV3OR16-9A0A0B4J2B5 98 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 FAM240AA0A1B0GVK7 77 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 H3BUT2 72 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 J3QQQ9 107 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 K7ERJ3 54 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 NDUFA1O15239 70 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 LGALS3P17931 250 aaKnown RBP4.12□□□□□ -1.75
PSEN1-216ENST00000556066 MRPS36P82909 103 aaKnown RBP4.12□□□□□ -1.75
PSEN1-216ENST00000556066 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 C10orf25Q5T742 122 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 UNQ6190/PRO20217Q6UXQ8 127 aa4.12□□□□□ -1.75
PSEN1-216ENST00000556066 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 UBE2D1P51668 147 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 VPS25Q9BRG1 176 aa4.11□□□□□ -1.75
PSEN1-216ENST00000556066 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
PSEN1-216ENST00000556066 CKS1BP61024 79 aa4.1□□□□□ -1.75
PSEN1-216ENST00000556066 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
PSEN1-216ENST00000556066 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 PFN2P35080 140 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 CDKN2A-AS1Q9UH64 79 aa4.09□□□□□ -1.75
PSEN1-216ENST00000556066 A0A0J9YXY3 114 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 PRSS2P07478 247 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 UBE2BP63146 152 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 KIAA0087Q14695 138 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 DIRC1Q969H9 104 aa4.08□□□□□ -1.76
PSEN1-216ENST00000556066 IGLV5-45A0A087WSX0 123 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 K7EP34 96 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 MUSTN1Q8IVN3 82 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 LITAFQ99732 161 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 SS18L2Q9UHA2 77 aa4.07□□□□□ -1.76
PSEN1-216ENST00000556066 IGLV9-49A0A0B4J1Y8 123 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 H0Y9J4 135 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 FABP2P12104 132 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 HERVK_113P63121 156 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 RPL24P83731 157 aaKnown RBP4.06□□□□□ -1.76
PSEN1-216ENST00000556066 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
PSEN1-216ENST00000556066 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 MRPL55Q7Z7F7 128 aaKnown RBP4.06□□□□□ -1.76
PSEN1-216ENST00000556066 TMEM126AQ9H061 195 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 NDUFA12Q9UI09 145 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 SPCS1Q9Y6A9 102 aa4.06□□□□□ -1.76
PSEN1-216ENST00000556066 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 K7ERU9 68 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 CFC1P0CG37 223 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 RPS28P62857 69 aaKnown RBP4.05□□□□□ -1.76
PSEN1-216ENST00000556066 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 XAGE1AQ9HD64 81 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
PSEN1-216ENST00000556066 NPC2P61916 151 aa4.04□□□□□ -1.76
PSEN1-216ENST00000556066 Q8IZM0 81 aa4.04□□□□□ -1.76
PSEN1-216ENST00000556066 ZNF625Q96I27 306 aaPredicted RBP4.04□□□□□ -1.76
PSEN1-216ENST00000556066 SPANXDQ9BXN6 97 aa4.04□□□□□ -1.76
PSEN1-216ENST00000556066 IGLV1-50A0A075B6I6 118 aa4.03□□□□□ -1.76
PSEN1-216ENST00000556066 SFTA2Q6UW10 78 aa4.03□□□□□ -1.76
PSEN1-216ENST00000556066 DAND5Q8N907 189 aa4.03□□□□□ -1.76
PSEN1-216ENST00000556066 C22orf24Q9Y442 160 aa4.03□□□□□ -1.76
PSEN1-216ENST00000556066 MUC2Q02817 5179 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 H7C2G1 150 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 TIMM17BO60830 172 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 PSMB2P49721 201 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 COX7B2Q8TF08 81 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 PRO1854Q9UHT4 67 aa4.02□□□□□ -1.77
PSEN1-216ENST00000556066 A0A0B4J2C4 111 aa4.01□□□□□ -1.77
PSEN1-216ENST00000556066 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms