RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
PSEN1-215ENST00000556011 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
PSEN1-215ENST00000556011 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
PSEN1-215ENST00000556011 TRBV6-8A0A0A6YYG3 113 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 IGHV1-58A0A0C4DH39 117 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 RNASE13Q5GAN3 156 aaKnown RBP3.78□□□□□ -1.8
PSEN1-215ENST00000556011 TMEM170BQ5T4T1 132 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 DAND5Q8N907 189 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 LITAFQ99732 161 aa3.78□□□□□ -1.8
PSEN1-215ENST00000556011 A6NDN8 102 aa3.77□□□□□ -1.81
PSEN1-215ENST00000556011 SMAGPQ0VAQ4 97 aa3.77□□□□□ -1.81
PSEN1-215ENST00000556011 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
PSEN1-215ENST00000556011 CDKN2A-AS1Q9UH64 79 aa3.77□□□□□ -1.81
PSEN1-215ENST00000556011 IGLV4-60A0A075B6I1 120 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 A0A0J9YXY3 114 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 HERVK_113P63121 156 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
PSEN1-215ENST00000556011 UBE2V1Q13404 147 aa3.76□□□□□ -1.81
PSEN1-215ENST00000556011 K7ERJ3 54 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 NDUFA1O15239 70 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 CCL25O15444 150 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 TIMM17BO60830 172 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 SPINK8P0C7L1 97 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 GAGE6Q13070 117 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 TMEM101Q96IK0 257 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 SPANXCQ9NY87 97 aa3.75□□□□□ -1.81
PSEN1-215ENST00000556011 IGHV3OR16-9A0A0B4J2B5 98 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 UBE2L6O14933 153 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 RBX1P62877 108 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 ZNF625Q96I27 306 aaPredicted RBP3.74□□□□□ -1.81
PSEN1-215ENST00000556011 GEMIN7Q9H840 131 aaKnown RBP3.74□□□□□ -1.81
PSEN1-215ENST00000556011 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
PSEN1-215ENST00000556011 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
PSEN1-215ENST00000556011 TRAV13-1A0A0B4J241 112 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 LINC00959A0A1B0GUT2 108 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 TMEM238C9JI98 176 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 H3BUT2 72 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 K7EP34 96 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 AMMECR1LQ6DCA0 310 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 SCGB1D4Q6XE38 83 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 LINC01561Q8N1V8 128 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
PSEN1-215ENST00000556011 IGLV10-54A0A075B6I4 117 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 A0A087WZ39 114 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 VAMP3Q15836 100 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 MIAQ16674 131 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 ADAMTSL4-AS1Q5T5F5 129 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 RAB37Q96AX2 223 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 NAA38Q9BRA0 125 aaKnown RBP3.72□□□□□ -1.81
PSEN1-215ENST00000556011 LINC00474Q9P2X8 69 aa3.72□□□□□ -1.81
PSEN1-215ENST00000556011 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
PSEN1-215ENST00000556011 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
PSEN1-215ENST00000556011 PHF5AQ7RTV0 110 aaKnown RBP3.71□□□□□ -1.82
PSEN1-215ENST00000556011 MUSTN1Q8IVN3 82 aa3.71□□□□□ -1.82
PSEN1-215ENST00000556011 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
PSEN1-215ENST00000556011 A0A1W2PNN7 141 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 FABP2P12104 132 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 IFITM1P13164 125 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 HERV-K104P63124 156 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 SOSTDC1Q6X4U4 206 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 COX7B2Q8TF08 81 aa3.7□□□□□ -1.82
PSEN1-215ENST00000556011 RPL24P83731 157 aaKnown RBP3.69□□□□□ -1.82
PSEN1-215ENST00000556011 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 GTF2H5Q6ZYL4 71 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 Q8N9P0 234 aaPredicted RBP3.69□□□□□ -1.82
PSEN1-215ENST00000556011 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 PRO1854Q9UHT4 67 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 PRO0461Q9UI25 63 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 SPCS1Q9Y6A9 102 aa3.69□□□□□ -1.82
PSEN1-215ENST00000556011 TMEM262E9PQX1 116 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 APOMO95445 188 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 KRTAP26-1Q6PEX3 210 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 Q8IZM0 81 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 LINC00269Q8N2A0 174 aa3.68□□□□□ -1.82
PSEN1-215ENST00000556011 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
PSEN1-215ENST00000556011 IGKV3OR2-268A0A0C4DH90 116 aa3.67□□□□□ -1.82
PSEN1-215ENST00000556011 REG3AQ06141 175 aa3.67□□□□□ -1.82
PSEN1-215ENST00000556011 SFTA2Q6UW10 78 aa3.67□□□□□ -1.82
PSEN1-215ENST00000556011 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
PSEN1-215ENST00000556011 LOC107984156A0A0G2JMH3 177 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 TRBV30A0A0K0K1B3 111 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 COX7A2LO14548 114 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 ANGP03950 147 aaKnown RBP3.66□□□□□ -1.82
PSEN1-215ENST00000556011 XCL1P47992 114 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
PSEN1-215ENST00000556011 ARL17AQ8IVW1 177 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms