RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 ENHOQ6UWT2 76 aa1.55□□□□□ -2.16
LINC00643-204ENST00000555934 SRCAPQ6ZRS2 3230 aa1.54□□□□□ -2.16
LINC00643-204ENST00000555934 TECTAO75443 2155 aa1.54□□□□□ -2.16
LINC00643-204ENST00000555934 COX7BP24311 80 aa1.53□□□□□ -2.16
LINC00643-204ENST00000555934 FCER1GP30273 86 aa1.53□□□□□ -2.16
LINC00643-204ENST00000555934 SSBP3-AS1Q7Z2R9 100 aa1.53□□□□□ -2.16
LINC00643-204ENST00000555934 UBL5Q9BZL1 73 aa1.53□□□□□ -2.16
LINC00643-204ENST00000555934 RPL37P61927 97 aaKnown RBP1.52□□□□□ -2.17
LINC00643-204ENST00000555934 ABCA1O95477 2261 aa1.52□□□□□ -2.17
LINC00643-204ENST00000555934 ROS1P08922 2347 aa1.51□□□□□ -2.17
LINC00643-204ENST00000555934 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
LINC00643-204ENST00000555934 BPTFQ12830 3046 aa1.51□□□□□ -2.17
LINC00643-204ENST00000555934 NDUFA4O00483 81 aa1.51□□□□□ -2.17
LINC00643-204ENST00000555934 ZFHX3Q15911 3703 aa1.51□□□□□ -2.17
LINC00643-204ENST00000555934 F5P12259 2224 aa1.5□□□□□ -2.17
LINC00643-204ENST00000555934 H0YGG7 62 aa1.5□□□□□ -2.17
LINC00643-204ENST00000555934 SERF2P84101 59 aa1.5□□□□□ -2.17
LINC00643-204ENST00000555934 CACNA1CQ13936 2221 aa1.5□□□□□ -2.17
LINC00643-204ENST00000555934 PRH1P02810 166 aa1.49□□□□□ -2.17
LINC00643-204ENST00000555934 SPTY2D1-AS1A0A0U1RR47 76 aa1.48□□□□□ -2.17
LINC00643-204ENST00000555934 K7EMI3 77 aa1.48□□□□□ -2.17
LINC00643-204ENST00000555934 ARHGAP5-AS1Q96IT6 56 aa1.48□□□□□ -2.17
LINC00643-204ENST00000555934 TTTY10Q9BZA0 68 aa1.48□□□□□ -2.17
LINC00643-204ENST00000555934 RPS27P42677 84 aaKnown RBP1.47□□□□□ -2.17
LINC00643-204ENST00000555934 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
LINC00643-204ENST00000555934 PCNTO95613 3336 aa1.46□□□□□ -2.18
LINC00643-204ENST00000555934 STATHP02808 62 aa1.46□□□□□ -2.18
LINC00643-204ENST00000555934 GOLGB1Q14789 3259 aaKnown RBP1.46□□□□□ -2.18
LINC00643-204ENST00000555934 ASCC3Q8N3C0 2202 aaKnown RBP1.46□□□□□ -2.18
LINC00643-204ENST00000555934 DEFB110Q30KQ9 67 aa1.45□□□□□ -2.18
LINC00643-204ENST00000555934 CADP27708 2225 aa1.45□□□□□ -2.18
LINC00643-204ENST00000555934 M0R1W7 72 aa1.44□□□□□ -2.18
LINC00643-204ENST00000555934 DEFB114Q30KQ6 69 aa1.44□□□□□ -2.18
LINC00643-204ENST00000555934 KCNQ1DNQ9H478 68 aa1.44□□□□□ -2.18
LINC00643-204ENST00000555934 TMEM167BQ9NRX6 74 aa1.44□□□□□ -2.18
LINC00643-204ENST00000555934 HTTP42858 3142 aa1.43□□□□□ -2.18
LINC00643-204ENST00000555934 H3BSH0 61 aa1.43□□□□□ -2.18
LINC00643-204ENST00000555934 PIGYQ3MUY2 71 aa1.43□□□□□ -2.18
LINC00643-204ENST00000555934 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
LINC00643-204ENST00000555934 SMIM27A0A1W2PRY6 76 aa1.42□□□□□ -2.18
LINC00643-204ENST00000555934 K7EIL1 84 aa1.42□□□□□ -2.18
LINC00643-204ENST00000555934 PLNP26678 52 aa1.42□□□□□ -2.18
LINC00643-204ENST00000555934 UTRNP46939 3433 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 MRPL33O75394 65 aaKnown RBP1.41□□□□□ -2.18
LINC00643-204ENST00000555934 IAPPP10997 89 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 TFF3Q07654 80 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 DEFB133Q30KQ1 61 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 U3KQA8 63 aa1.41□□□□□ -2.18
LINC00643-204ENST00000555934 CEP350Q5VT06 3117 aa1.4□□□□□ -2.18
LINC00643-204ENST00000555934 BRCA2P51587 3418 aa1.4□□□□□ -2.18
LINC00643-204ENST00000555934 I3L3M4 83 aa1.4□□□□□ -2.19
LINC00643-204ENST00000555934 PRCDQ00LT1 54 aa1.4□□□□□ -2.19
LINC00643-204ENST00000555934 ASXL3Q9C0F0 2248 aa1.4□□□□□ -2.19
LINC00643-204ENST00000555934 CENPFP49454 3210 aa1.4□□□□□ -2.19
LINC00643-204ENST00000555934 LINC01546A6NGU7 62 aa1.39□□□□□ -2.19
LINC00643-204ENST00000555934 TMEM167AQ8TBQ9 72 aa1.39□□□□□ -2.19
LINC00643-204ENST00000555934 CNFNQ9BYD5 112 aa1.39□□□□□ -2.19
LINC00643-204ENST00000555934 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
LINC00643-204ENST00000555934 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
LINC00643-204ENST00000555934 DEFB131BA0A096LNP1 70 aa1.38□□□□□ -2.19
LINC00643-204ENST00000555934 I3L2K1 104 aa1.38□□□□□ -2.19
LINC00643-204ENST00000555934 PRB3Q04118 309 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-204ENST00000555934 TNCP24821 2201 aa1.38□□□□□ -2.19
LINC00643-204ENST00000555934 GOLGA4Q13439 2230 aaKnown RBP1.38□□□□□ -2.19
LINC00643-204ENST00000555934 CACNA1EQ15878 2313 aa1.37□□□□□ -2.19
LINC00643-204ENST00000555934 COX6B1P14854 86 aa1.37□□□□□ -2.19
LINC00643-204ENST00000555934 KLK9Q2XQG4 91 aa1.37□□□□□ -2.19
LINC00643-204ENST00000555934 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
LINC00643-204ENST00000555934 KAAG1Q9UBP8 84 aa1.37□□□□□ -2.19
LINC00643-204ENST00000555934 UNC79Q9P2D8 2635 aa1.36□□□□□ -2.19
LINC00643-204ENST00000555934 DNAH12Q6ZR08 3092 aa1.36□□□□□ -2.19
LINC00643-204ENST00000555934 RPL39P5Q59GN2 51 aa1.36□□□□□ -2.19
LINC00643-204ENST00000555934 PDE4DIPQ5VU43 2346 aa1.36□□□□□ -2.19
LINC00643-204ENST00000555934 DEFB123Q8N688 67 aa1.36□□□□□ -2.19
LINC00643-204ENST00000555934 USF3Q68DE3 2245 aa1.35□□□□□ -2.19
LINC00643-204ENST00000555934 URB1O60287 2271 aaKnown RBP1.35□□□□□ -2.19
LINC00643-204ENST00000555934 K7EQZ3 153 aa1.35□□□□□ -2.19
LINC00643-204ENST00000555934 NDUFA3O95167 84 aa1.35□□□□□ -2.19
LINC00643-204ENST00000555934 CRIP1P50238 77 aa1.35□□□□□ -2.19
LINC00643-204ENST00000555934 WT1-ASQ06250 92 aa1.35□□□□□ -2.19
LINC00643-204ENST00000555934 ANKRD17O75179 2603 aaKnown RBP1.35□□□□□ -2.19
LINC00643-204ENST00000555934 A0A0C4DFX4 3053 aa1.34□□□□□ -2.19
LINC00643-204ENST00000555934 DEFB108AA8MXU0 73 aa1.34□□□□□ -2.19
LINC00643-204ENST00000555934 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
LINC00643-204ENST00000555934 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.19
LINC00643-204ENST00000555934 PRO3102Q9H379 93 aa1.34□□□□□ -2.19
LINC00643-204ENST00000555934 CHD7Q9P2D1 2997 aa1.34□□□□□ -2.2
LINC00643-204ENST00000555934 UNC80Q8N2C7 3258 aa1.34□□□□□ -2.2
LINC00643-204ENST00000555934 ZDBF2Q9HCK1 2354 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 H0YGX0 51 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 K7EIM0 57 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 SPINK4O60575 86 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 MINOS1Q5TGZ0 78 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 SMIM2Q9BVW6 85 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 TIMM8BQ9Y5J9 83 aaPredicted RBP1.33□□□□□ -2.2
LINC00643-204ENST00000555934 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
LINC00643-204ENST00000555934 KNTC1P50748 2209 aa1.32□□□□□ -2.2
LINC00643-204ENST00000555934 MKI67P46013 3256 aaKnown RBP1.32□□□□□ -2.2
LINC00643-204ENST00000555934 H3BUA1 57 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms