RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DLEU1O43261 78 aa12.05□□□□□ -0.48
VTI1B-205ENST00000555543 FAM229BQ4G0N7 80 aa12.05□□□□□ -0.48
VTI1B-205ENST00000555543 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
VTI1B-205ENST00000555543 SOSTDC1Q6X4U4 206 aa12.05□□□□□ -0.48
VTI1B-205ENST00000555543 TYMSOSQ8TAI1 123 aa12.05□□□□□ -0.48
VTI1B-205ENST00000555543 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
VTI1B-205ENST00000555543 PCP2Q8IVA1 136 aa12.04□□□□□ -0.48
VTI1B-205ENST00000555543 NPC2P61916 151 aa12.03□□□□□ -0.48
VTI1B-205ENST00000555543 LINC00337Q8N6G1 96 aa12.03□□□□□ -0.48
VTI1B-205ENST00000555543 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.49
VTI1B-205ENST00000555543 PCP4L1A6NKN8 68 aa12.02□□□□□ -0.49
VTI1B-205ENST00000555543 LITAFQ99732 161 aa12.02□□□□□ -0.49
VTI1B-205ENST00000555543 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
VTI1B-205ENST00000555543 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
VTI1B-205ENST00000555543 DDTP30046 118 aa12.01□□□□□ -0.49
VTI1B-205ENST00000555543 NDUFC2O95298 119 aa12□□□□□ -0.49
VTI1B-205ENST00000555543 TSPAN13O95857 204 aa12□□□□□ -0.49
VTI1B-205ENST00000555543 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
VTI1B-205ENST00000555543 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
VTI1B-205ENST00000555543 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
VTI1B-205ENST00000555543 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
VTI1B-205ENST00000555543 IGLV6-57P01721 117 aa11.96□□□□□ -0.49
VTI1B-205ENST00000555543 C3orf22Q8N5N4 141 aa11.96□□□□□ -0.49
VTI1B-205ENST00000555543 B5MCH6 92 aa11.95□□□□□ -0.5
VTI1B-205ENST00000555543 TIMM17BO60830 172 aa11.95□□□□□ -0.5
VTI1B-205ENST00000555543 C2orf91Q6ZV80 131 aa11.95□□□□□ -0.5
VTI1B-205ENST00000555543 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
VTI1B-205ENST00000555543 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
VTI1B-205ENST00000555543 PRR4Q16378 134 aa11.93□□□□□ -0.5
VTI1B-205ENST00000555543 LINC00304Q8N9R0 145 aa11.93□□□□□ -0.5
VTI1B-205ENST00000555543 HIGD1BQ9P298 99 aa11.93□□□□□ -0.5
VTI1B-205ENST00000555543 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
VTI1B-205ENST00000555543 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
VTI1B-205ENST00000555543 ERC2-IT1O76042 136 aa11.91□□□□□ -0.5
VTI1B-205ENST00000555543 Q9BRP9 147 aa11.91□□□□□ -0.5
VTI1B-205ENST00000555543 CTAG1AP78358 180 aa11.9□□□□□ -0.5
VTI1B-205ENST00000555543 Q6ZRX8 168 aa11.9□□□□□ -0.5
VTI1B-205ENST00000555543 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
VTI1B-205ENST00000555543 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
VTI1B-205ENST00000555543 PPDPFQ9H3Y8 114 aa11.89□□□□□ -0.51
VTI1B-205ENST00000555543 ZNF73O43830 326 aaPredicted RBP11.87□□□□□ -0.51
VTI1B-205ENST00000555543 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
VTI1B-205ENST00000555543 HSD52Q0P140 79 aa11.85□□□□□ -0.51
VTI1B-205ENST00000555543 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
VTI1B-205ENST00000555543 GAGE2AQ6NT46 116 aa11.84□□□□□ -0.51
VTI1B-205ENST00000555543 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
VTI1B-205ENST00000555543 TAL2Q16559 108 aa11.83□□□□□ -0.52
VTI1B-205ENST00000555543 OR13C6PQ8NH95 151 aa11.83□□□□□ -0.52
VTI1B-205ENST00000555543 M0R143 59 aa11.8□□□□□ -0.52
VTI1B-205ENST00000555543 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
VTI1B-205ENST00000555543 Q8NBF4 154 aa11.79□□□□□ -0.52
VTI1B-205ENST00000555543 HINT1P49773 126 aaPredicted RBP11.78□□□□□ -0.52
VTI1B-205ENST00000555543 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
VTI1B-205ENST00000555543 CBY1Q9Y3M2 126 aa11.78□□□□□ -0.52
VTI1B-205ENST00000555543 Q6ZVH6 145 aa11.77□□□□□ -0.53
VTI1B-205ENST00000555543 CEND1Q8N111 149 aa11.77□□□□□ -0.53
VTI1B-205ENST00000555543 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.53
VTI1B-205ENST00000555543 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
VTI1B-205ENST00000555543 IGLV9-49A0A0B4J1Y8 123 aa11.75□□□□□ -0.53
VTI1B-205ENST00000555543 IFITM1P13164 125 aa11.75□□□□□ -0.53
VTI1B-205ENST00000555543 MOBPQ13875 183 aa11.75□□□□□ -0.53
VTI1B-205ENST00000555543 SPAG11AQ6PDA7 123 aa11.75□□□□□ -0.53
VTI1B-205ENST00000555543 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
VTI1B-205ENST00000555543 BATFQ16520 125 aa11.73□□□□□ -0.53
VTI1B-205ENST00000555543 FXYD2P54710 66 aa11.72□□□□□ -0.53
VTI1B-205ENST00000555543 C6orf99Q4VX62 202 aa11.72□□□□□ -0.53
VTI1B-205ENST00000555543 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
VTI1B-205ENST00000555543 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.53
VTI1B-205ENST00000555543 C4orf48Q5BLP8 95 aa11.7□□□□□ -0.54
VTI1B-205ENST00000555543 COX7BP24311 80 aa11.69□□□□□ -0.54
VTI1B-205ENST00000555543 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
VTI1B-205ENST00000555543 MUC2Q02817 5179 aa11.68□□□□□ -0.54
VTI1B-205ENST00000555543 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
VTI1B-205ENST00000555543 A6NJY4 79 aa11.68□□□□□ -0.54
VTI1B-205ENST00000555543 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
VTI1B-205ENST00000555543 A6NDN8 102 aa11.67□□□□□ -0.54
VTI1B-205ENST00000555543 SSBP3-AS1Q7Z2R9 100 aa11.67□□□□□ -0.54
VTI1B-205ENST00000555543 A4D1N5 150 aa11.65□□□□□ -0.54
VTI1B-205ENST00000555543 SPINK1P00995 79 aa11.65□□□□□ -0.54
VTI1B-205ENST00000555543 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
VTI1B-205ENST00000555543 C9orf153Q5TBE3 101 aa11.65□□□□□ -0.54
VTI1B-205ENST00000555543 SPRR1BP22528 89 aa11.64□□□□□ -0.55
VTI1B-205ENST00000555543 TPRXLQ17RH7 258 aa11.64□□□□□ -0.55
VTI1B-205ENST00000555543 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
VTI1B-205ENST00000555543 A0A1B0GWB2 263 aa11.63□□□□□ -0.55
VTI1B-205ENST00000555543 NHP2Q9NX24 153 aaKnown RBP11.63□□□□□ -0.55
VTI1B-205ENST00000555543 TRAV13-2A0A0B4J235 113 aa11.61□□□□□ -0.55
VTI1B-205ENST00000555543 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
VTI1B-205ENST00000555543 CFC1P0CG37 223 aa11.6□□□□□ -0.55
VTI1B-205ENST00000555543 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
VTI1B-205ENST00000555543 K7ERJ3 54 aa11.59□□□□□ -0.55
VTI1B-205ENST00000555543 FP248Q71RG6 208 aaPredicted RBP11.59□□□□□ -0.55
VTI1B-205ENST00000555543 SMIM11BQ8TCY0 68 aa11.59□□□□□ -0.55
VTI1B-205ENST00000555543 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.56
VTI1B-205ENST00000555543 Q8N377 158 aa11.58□□□□□ -0.56
VTI1B-205ENST00000555543 MUC17Q685J3 4493 aa11.57□□□□□ -0.56
VTI1B-205ENST00000555543 TAX1BP3O14907 124 aa11.57□□□□□ -0.56
VTI1B-205ENST00000555543 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
VTI1B-205ENST00000555543 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
VTI1B-205ENST00000555543 RAB37Q96AX2 223 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms