RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 JOSD1Q15040 202 aaPredicted RBP14.02□□□□□ -0.17
PRKCH-216ENST00000555542 LINC01545Q5VT33 79 aa14.02□□□□□ -0.17
PRKCH-216ENST00000555542 PET117Q6UWS5 81 aa14.02□□□□□ -0.17
PRKCH-216ENST00000555542 Q9BRP9 147 aa14.02□□□□□ -0.17
PRKCH-216ENST00000555542 IGLV9-49A0A0B4J1Y8 123 aa14.01□□□□□ -0.17
PRKCH-216ENST00000555542 EIF4EBP3O60516 100 aaPredicted RBP14.01□□□□□ -0.17
PRKCH-216ENST00000555542 TPRXLQ17RH7 258 aa14.01□□□□□ -0.17
PRKCH-216ENST00000555542 ZNF73O43830 326 aaPredicted RBP13.99□□□□□ -0.17
PRKCH-216ENST00000555542 MOBPQ13875 183 aa13.99□□□□□ -0.17
PRKCH-216ENST00000555542 CBY1Q9Y3M2 126 aa13.99□□□□□ -0.17
PRKCH-216ENST00000555542 ZNF815PA8K554 130 aa13.98□□□□□ -0.17
PRKCH-216ENST00000555542 HINT1P49773 126 aaPredicted RBP13.98□□□□□ -0.17
PRKCH-216ENST00000555542 A0A0U1RQV1 116 aa13.97□□□□□ -0.17
PRKCH-216ENST00000555542 OR13C6PQ8NH95 151 aa13.97□□□□□ -0.17
PRKCH-216ENST00000555542 KRTDAPP60985 99 aa13.96□□□□□ -0.17
PRKCH-216ENST00000555542 LINC00308Q8TCZ7 52 aa13.96□□□□□ -0.17
PRKCH-216ENST00000555542 SPANXCQ9NY87 97 aa13.96□□□□□ -0.17
PRKCH-216ENST00000555542 TIMM17BO60830 172 aa13.95□□□□□ -0.18
PRKCH-216ENST00000555542 SPINK1P00995 79 aa13.95□□□□□ -0.18
PRKCH-216ENST00000555542 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
PRKCH-216ENST00000555542 LITAFQ99732 161 aa13.94□□□□□ -0.18
PRKCH-216ENST00000555542 FP248Q71RG6 208 aaPredicted RBP13.93□□□□□ -0.18
PRKCH-216ENST00000555542 TTTY13Q9BZ97 58 aa13.92□□□□□ -0.18
PRKCH-216ENST00000555542 C9orf153Q5TBE3 101 aa13.91□□□□□ -0.18
PRKCH-216ENST00000555542 SSBP3-AS1Q7Z2R9 100 aa13.91□□□□□ -0.18
PRKCH-216ENST00000555542 MUC2Q02817 5179 aa13.91□□□□□ -0.18
PRKCH-216ENST00000555542 C20orf202A1L168 122 aa13.9□□□□□ -0.18
PRKCH-216ENST00000555542 COA6Q5JTJ3 125 aaKnown RBP13.89□□□□□ -0.19
PRKCH-216ENST00000555542 SCGB1D4Q6XE38 83 aa13.88□□□□□ -0.19
PRKCH-216ENST00000555542 ST20-AS1Q8NBB2 130 aa13.87□□□□□ -0.19
PRKCH-216ENST00000555542 SPANXDQ9BXN6 97 aa13.87□□□□□ -0.19
PRKCH-216ENST00000555542 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
PRKCH-216ENST00000555542 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
PRKCH-216ENST00000555542 RPS29P62273 56 aaKnown RBP13.82□□□□□ -0.2
PRKCH-216ENST00000555542 DHRS4-AS1Q9P1J3 65 aa13.82□□□□□ -0.2
PRKCH-216ENST00000555542 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
PRKCH-216ENST00000555542 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
PRKCH-216ENST00000555542 SLC25A20O43772 301 aa13.79□□□□□ -0.2
PRKCH-216ENST00000555542 COX7BP24311 80 aa13.79□□□□□ -0.2
PRKCH-216ENST00000555542 ANKRD39Q53RE8 183 aa13.79□□□□□ -0.2
PRKCH-216ENST00000555542 Q8N377 158 aa13.79□□□□□ -0.2
PRKCH-216ENST00000555542 C6orf99Q4VX62 202 aa13.78□□□□□ -0.2
PRKCH-216ENST00000555542 SLC25A34Q6PIV7 304 aa13.78□□□□□ -0.2
PRKCH-216ENST00000555542 KRTAP13-3Q3SY46 172 aa13.77□□□□□ -0.21
PRKCH-216ENST00000555542 AKR1D1P51857 326 aa13.76□□□□□ -0.21
PRKCH-216ENST00000555542 ELOF1P60002 83 aaKnown RBP13.75□□□□□ -0.21
PRKCH-216ENST00000555542 IFITM1P13164 125 aa13.73□□□□□ -0.21
PRKCH-216ENST00000555542 LAMTOR3Q9UHA4 124 aa13.73□□□□□ -0.21
PRKCH-216ENST00000555542 A6NDN8 102 aa13.72□□□□□ -0.21
PRKCH-216ENST00000555542 SPRR1BP22528 89 aa13.72□□□□□ -0.21
PRKCH-216ENST00000555542 MUC17Q685J3 4493 aa13.71□□□□□ -0.21
PRKCH-216ENST00000555542 TAL2Q16559 108 aa13.71□□□□□ -0.21
PRKCH-216ENST00000555542 Q6ZVH6 145 aa13.71□□□□□ -0.21
PRKCH-216ENST00000555542 PCP2Q8IVA1 136 aa13.71□□□□□ -0.21
PRKCH-216ENST00000555542 DEFB105AQ8NG35 78 aa13.7□□□□□ -0.22
PRKCH-216ENST00000555542 MUSTN1Q8IVN3 82 aa13.69□□□□□ -0.22
PRKCH-216ENST00000555542 HRCT1Q6UXD1 115 aa13.68□□□□□ -0.22
PRKCH-216ENST00000555542 S100A2P29034 98 aa13.67□□□□□ -0.22
PRKCH-216ENST00000555542 TRBV7-6A0A0J9YX20 115 aa13.66□□□□□ -0.22
PRKCH-216ENST00000555542 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
PRKCH-216ENST00000555542 SNRPEP62304 92 aaKnown RBP13.66□□□□□ -0.22
PRKCH-216ENST00000555542 LIMD2Q9BT23 127 aa13.66□□□□□ -0.22
PRKCH-216ENST00000555542 Q1RN00 199 aa13.65□□□□□ -0.22
PRKCH-216ENST00000555542 TEX49A0A1B0GTD5 131 aa13.63□□□□□ -0.23
PRKCH-216ENST00000555542 SEC61BP60468 96 aaKnown RBP13.62□□□□□ -0.23
PRKCH-216ENST00000555542 ASB16-AS1Q495Z4 193 aa13.62□□□□□ -0.23
PRKCH-216ENST00000555542 TRAV13-2A0A0B4J235 113 aa13.61□□□□□ -0.23
PRKCH-216ENST00000555542 HSBP1L1C9JCN9 74 aa13.61□□□□□ -0.23
PRKCH-216ENST00000555542 HIST3H2BBQ8N257 126 aa13.61□□□□□ -0.23
PRKCH-216ENST00000555542 HIST1H2BLQ99880 126 aa13.6□□□□□ -0.23
PRKCH-216ENST00000555542 A4D1N5 150 aa13.58□□□□□ -0.24
PRKCH-216ENST00000555542 PRO1933Q9H354 126 aa13.58□□□□□ -0.24
PRKCH-216ENST00000555542 S100A6P06703 90 aa13.57□□□□□ -0.24
PRKCH-216ENST00000555542 NHP2Q9NX24 153 aaKnown RBP13.56□□□□□ -0.24
PRKCH-216ENST00000555542 FAT4Q6V0I7 4981 aa13.55□□□□□ -0.24
PRKCH-216ENST00000555542 SMIM11BQ8TCY0 68 aa13.55□□□□□ -0.24
PRKCH-216ENST00000555542 S100A1P23297 94 aa13.54□□□□□ -0.24
PRKCH-216ENST00000555542 H7C2G1 150 aa13.53□□□□□ -0.24
PRKCH-216ENST00000555542 LCE2AQ5TA79 106 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-216ENST00000555542 CD164Q04900 197 aa13.52□□□□□ -0.25
PRKCH-216ENST00000555542 IGLV5-48A0A075B6I7 105 aa13.51□□□□□ -0.25
PRKCH-216ENST00000555542 XP32Q5T750 250 aa13.51□□□□□ -0.25
PRKCH-216ENST00000555542 LINC01547P58512 204 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-216ENST00000555542 VAMP3Q15836 100 aa13.5□□□□□ -0.25
PRKCH-216ENST00000555542 SMIM29Q86T20 159 aa13.5□□□□□ -0.25
PRKCH-216ENST00000555542 C9orf92A6NGG3 77 aa13.45□□□□□ -0.26
PRKCH-216ENST00000555542 SCGB1D1O95968 90 aa13.45□□□□□ -0.26
PRKCH-216ENST00000555542 A0A0G2JQZ4 141 aa13.43□□□□□ -0.26
PRKCH-216ENST00000555542 F8WEM9 126 aa13.43□□□□□ -0.26
PRKCH-216ENST00000555542 KRTAP4-1Q9BYQ7 146 aa13.43□□□□□ -0.26
PRKCH-216ENST00000555542 HIST1H4GQ99525 98 aa13.4□□□□□ -0.26
PRKCH-216ENST00000555542 LINC00575Q6W349 94 aa13.39□□□□□ -0.27
PRKCH-216ENST00000555542 C12orf57Q99622 126 aa13.39□□□□□ -0.27
PRKCH-216ENST00000555542 Q5XG85 94 aa13.38□□□□□ -0.27
PRKCH-216ENST00000555542 hADV29S1A0JD25 119 aa13.37□□□□□ -0.27
PRKCH-216ENST00000555542 Q6ZQY7 126 aa13.37□□□□□ -0.27
PRKCH-216ENST00000555542 C1orf195Q5TG92 126 aa13.34□□□□□ -0.27
PRKCH-216ENST00000555542 TCL1BO95988 128 aa13.33□□□□□ -0.28
PRKCH-216ENST00000555542 COX8AP10176 69 aa13.33□□□□□ -0.28
PRKCH-216ENST00000555542 KRTAP9-2Q9BYQ4 174 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms