RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
TDP1-211ENST00000555178 PSMB2P49721 201 aa6.72□□□□□ -1.33
TDP1-211ENST00000555178 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
TDP1-211ENST00000555178 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
TDP1-211ENST00000555178 C6orf99Q4VX62 202 aa6.71□□□□□ -1.34
TDP1-211ENST00000555178 LBHQ53QV2 105 aaPredicted RBP6.71□□□□□ -1.34
TDP1-211ENST00000555178 FAT1Q14517 4588 aa6.71□□□□□ -1.34
TDP1-211ENST00000555178 A0A1B0GV90 55 aa6.7□□□□□ -1.34
TDP1-211ENST00000555178 RYR1P21817 5038 aa6.7□□□□□ -1.34
TDP1-211ENST00000555178 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
TDP1-211ENST00000555178 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
TDP1-211ENST00000555178 UBE2BP63146 152 aa6.7□□□□□ -1.34
TDP1-211ENST00000555178 CLEC2BQ92478 149 aa6.69□□□□□ -1.34
TDP1-211ENST00000555178 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
TDP1-211ENST00000555178 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
TDP1-211ENST00000555178 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
TDP1-211ENST00000555178 SCGB1C2P0DMR2 95 aa6.67□□□□□ -1.34
TDP1-211ENST00000555178 DIRC1Q969H9 104 aa6.66□□□□□ -1.34
TDP1-211ENST00000555178 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
TDP1-211ENST00000555178 PRYO14603 147 aa6.66□□□□□ -1.34
TDP1-211ENST00000555178 TCL1BO95988 128 aa6.66□□□□□ -1.34
TDP1-211ENST00000555178 FABP2P12104 132 aa6.66□□□□□ -1.34
TDP1-211ENST00000555178 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
TDP1-211ENST00000555178 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.34
TDP1-211ENST00000555178 SPRR1AP35321 89 aa6.65□□□□□ -1.34
TDP1-211ENST00000555178 VAMP3Q15836 100 aa6.65□□□□□ -1.35
TDP1-211ENST00000555178 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.35
TDP1-211ENST00000555178 PRLHP81277 87 aa6.64□□□□□ -1.35
TDP1-211ENST00000555178 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
TDP1-211ENST00000555178 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
TDP1-211ENST00000555178 COX6CP09669 75 aa6.63□□□□□ -1.35
TDP1-211ENST00000555178 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
TDP1-211ENST00000555178 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 B5MCH6 92 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 H3BMG7 143 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 COX7BP24311 80 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 Q9BRP9 147 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 K7EP34 96 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
TDP1-211ENST00000555178 LST1O00453 97 aa6.61□□□□□ -1.35
TDP1-211ENST00000555178 Q6ZRX8 168 aa6.61□□□□□ -1.35
TDP1-211ENST00000555178 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
TDP1-211ENST00000555178 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
TDP1-211ENST00000555178 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
TDP1-211ENST00000555178 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 H0YGX0 51 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 BCE1O60756 84 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
TDP1-211ENST00000555178 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
TDP1-211ENST00000555178 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.35
TDP1-211ENST00000555178 TRBV7-6A0A0J9YX20 115 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 UBE2AP49459 152 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
TDP1-211ENST00000555178 hADV29S1A0JD25 119 aa6.57□□□□□ -1.36
TDP1-211ENST00000555178 ST20-AS1Q8NBB2 130 aa6.57□□□□□ -1.36
TDP1-211ENST00000555178 C9JAW5 83 aa6.56□□□□□ -1.36
TDP1-211ENST00000555178 Q6ZQY7 126 aa6.56□□□□□ -1.36
TDP1-211ENST00000555178 GTF2H5Q6ZYL4 71 aa6.56□□□□□ -1.36
TDP1-211ENST00000555178 TRACP01848 142 aa6.55□□□□□ -1.36
TDP1-211ENST00000555178 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
TDP1-211ENST00000555178 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
TDP1-211ENST00000555178 IGLV7-43P04211 117 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 RPL37AP61513 92 aaKnown RBP6.54□□□□□ -1.36
TDP1-211ENST00000555178 SLC25A20O43772 301 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 DNAL4O96015 105 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
TDP1-211ENST00000555178 Q5VSD8 79 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 HERC2O95714 4834 aa6.54□□□□□ -1.36
TDP1-211ENST00000555178 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
TDP1-211ENST00000555178 H0Y9J4 135 aa6.53□□□□□ -1.36
TDP1-211ENST00000555178 DEFB105AQ8NG35 78 aa6.53□□□□□ -1.36
TDP1-211ENST00000555178 ZNF861PO60384 105 aa6.52□□□□□ -1.37
TDP1-211ENST00000555178 A0A1B0GX51 115 aa6.52□□□□□ -1.37
TDP1-211ENST00000555178 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
TDP1-211ENST00000555178 LINC01547P58512 204 aaPredicted RBP6.52□□□□□ -1.37
TDP1-211ENST00000555178 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
TDP1-211ENST00000555178 A0A1B0GV72 72 aa6.51□□□□□ -1.37
TDP1-211ENST00000555178 Q8N1X5 172 aa6.51□□□□□ -1.37
TDP1-211ENST00000555178 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
TDP1-211ENST00000555178 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
TDP1-211ENST00000555178 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.5□□□□□ -1.37
TDP1-211ENST00000555178 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
TDP1-211ENST00000555178 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
TDP1-211ENST00000555178 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
TDP1-211ENST00000555178 Q8N377 158 aa6.49□□□□□ -1.37
TDP1-211ENST00000555178 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
TDP1-211ENST00000555178 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
TDP1-211ENST00000555178 SNCGO76070 127 aa6.48□□□□□ -1.37
TDP1-211ENST00000555178 ANKRD29Q8N6D5 301 aa6.48□□□□□ -1.37
TDP1-211ENST00000555178 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
TDP1-211ENST00000555178 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
TDP1-211ENST00000555178 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.37
TDP1-211ENST00000555178 F8W1H4 67 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms