RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 Q8IZM0 81 aa11.29□□□□□ -0.6
PCNX1-209ENST00000554879 LINC01547P58512 204 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-209ENST00000554879 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
PCNX1-209ENST00000554879 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
PCNX1-209ENST00000554879 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.6
PCNX1-209ENST00000554879 NKAPP1Q8N9T2 125 aa11.27□□□□□ -0.61
PCNX1-209ENST00000554879 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
PCNX1-209ENST00000554879 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
PCNX1-209ENST00000554879 PRYO14603 147 aa11.26□□□□□ -0.61
PCNX1-209ENST00000554879 Q6ZVQ6 151 aa11.25□□□□□ -0.61
PCNX1-209ENST00000554879 M0R2N4 97 aa11.24□□□□□ -0.61
PCNX1-209ENST00000554879 Q6ZQY7 126 aa11.23□□□□□ -0.61
PCNX1-209ENST00000554879 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
PCNX1-209ENST00000554879 HIGD2AQ9BW72 106 aa11.23□□□□□ -0.61
PCNX1-209ENST00000554879 C3orf84H3BNL1 204 aa11.23□□□□□ -0.61
PCNX1-209ENST00000554879 A6NED7 52 aa11.23□□□□□ -0.61
PCNX1-209ENST00000554879 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.22□□□□□ -0.61
PCNX1-209ENST00000554879 Q8N814 137 aa11.21□□□□□ -0.62
PCNX1-209ENST00000554879 SYCNQ0VAF6 134 aa11.21□□□□□ -0.62
PCNX1-209ENST00000554879 IGKV2-24A0A0C4DH68 120 aa11.2□□□□□ -0.62
PCNX1-209ENST00000554879 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
PCNX1-209ENST00000554879 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
PCNX1-209ENST00000554879 H3BNG1 76 aa11.18□□□□□ -0.62
PCNX1-209ENST00000554879 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
PCNX1-209ENST00000554879 CD164Q04900 197 aa11.17□□□□□ -0.62
PCNX1-209ENST00000554879 LINC00588Q9Y4M8 146 aa11.17□□□□□ -0.62
PCNX1-209ENST00000554879 PKD1L1Q8TDX9 2849 aa11.17□□□□□ -0.62
PCNX1-209ENST00000554879 TENM3Q9P273 2699 aa11.16□□□□□ -0.62
PCNX1-209ENST00000554879 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
PCNX1-209ENST00000554879 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
PCNX1-209ENST00000554879 IGKV2-28A0A075B6P5 120 aa11.15□□□□□ -0.62
PCNX1-209ENST00000554879 IGKV2D-28P01615 120 aa11.15□□□□□ -0.62
PCNX1-209ENST00000554879 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
PCNX1-209ENST00000554879 PRR15LQ9BU68 103 aa11.14□□□□□ -0.63
PCNX1-209ENST00000554879 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
PCNX1-209ENST00000554879 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
PCNX1-209ENST00000554879 Q6ZRU5 148 aa11.12□□□□□ -0.63
PCNX1-209ENST00000554879 A8MUN3 132 aa11.12□□□□□ -0.63
PCNX1-209ENST00000554879 UBE2BP63146 152 aa11.11□□□□□ -0.63
PCNX1-209ENST00000554879 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
PCNX1-209ENST00000554879 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
PCNX1-209ENST00000554879 COX17Q14061 63 aa11.1□□□□□ -0.63
PCNX1-209ENST00000554879 PDE6GP18545 87 aa11.1□□□□□ -0.63
PCNX1-209ENST00000554879 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
PCNX1-209ENST00000554879 NUPR2A6NF83 97 aa11.08□□□□□ -0.63
PCNX1-209ENST00000554879 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.07□□□□□ -0.64
PCNX1-209ENST00000554879 C6orf48Q9UBA6 75 aa11.07□□□□□ -0.64
PCNX1-209ENST00000554879 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
PCNX1-209ENST00000554879 LY6G6CO95867 125 aa11.06□□□□□ -0.64
PCNX1-209ENST00000554879 MP68P56378 58 aa11.06□□□□□ -0.64
PCNX1-209ENST00000554879 C4orf48Q5BLP8 95 aa11.06□□□□□ -0.64
PCNX1-209ENST00000554879 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
PCNX1-209ENST00000554879 UBE2AP49459 152 aa11.04□□□□□ -0.64
PCNX1-209ENST00000554879 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
PCNX1-209ENST00000554879 RPL37AP8A6NKH3 93 aa11.04□□□□□ -0.64
PCNX1-209ENST00000554879 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
PCNX1-209ENST00000554879 MUC7Q8TAX7 377 aa11.02□□□□□ -0.65
PCNX1-209ENST00000554879 DNAH10OSP0CZ25 163 aa11.02□□□□□ -0.65
PCNX1-209ENST00000554879 Q6ZQT0 140 aa11.01□□□□□ -0.65
PCNX1-209ENST00000554879 COX7BP24311 80 aa11□□□□□ -0.65
PCNX1-209ENST00000554879 DEFB116Q30KQ4 102 aa11□□□□□ -0.65
PCNX1-209ENST00000554879 WFDC13Q8IUB5 93 aa11□□□□□ -0.65
PCNX1-209ENST00000554879 CXCL6P80162 114 aa10.99□□□□□ -0.65
PCNX1-209ENST00000554879 LINC00575Q6W349 94 aa10.99□□□□□ -0.65
PCNX1-209ENST00000554879 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
PCNX1-209ENST00000554879 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
PCNX1-209ENST00000554879 C14orf177Q52M58 125 aa10.98□□□□□ -0.65
PCNX1-209ENST00000554879 C1orf64Q8NEQ6 169 aa10.98□□□□□ -0.65
PCNX1-209ENST00000554879 SMIM29Q86T20 159 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 M0R378 163 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 BCE1O60756 84 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 PRR15Q8IV56 129 aa10.97□□□□□ -0.65
PCNX1-209ENST00000554879 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
PCNX1-209ENST00000554879 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
PCNX1-209ENST00000554879 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
PCNX1-209ENST00000554879 Q6ZRP5 223 aa10.91□□□□□ -0.66
PCNX1-209ENST00000554879 KTN1-AS1Q86SY8 53 aa10.9□□□□□ -0.66
PCNX1-209ENST00000554879 H3BS24 57 aa10.89□□□□□ -0.67
PCNX1-209ENST00000554879 GVQW2A0A096LPI5 108 aaPredicted RBP10.88□□□□□ -0.67
PCNX1-209ENST00000554879 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
PCNX1-209ENST00000554879 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
PCNX1-209ENST00000554879 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
PCNX1-209ENST00000554879 NDUFS5O43920 106 aa10.87□□□□□ -0.67
PCNX1-209ENST00000554879 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
PCNX1-209ENST00000554879 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
PCNX1-209ENST00000554879 SERTAD4-AS1Q5TG53 156 aa10.83□□□□□ -0.68
PCNX1-209ENST00000554879 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
PCNX1-209ENST00000554879 hDV103S1A0JD37 113 aa10.83□□□□□ -0.68
PCNX1-209ENST00000554879 NDUFB1O75438 58 aa10.83□□□□□ -0.68
PCNX1-209ENST00000554879 H3BQ85 93 aa10.82□□□□□ -0.68
PCNX1-209ENST00000554879 CHTF8P0CG12 524 aa10.81□□□□□ -0.68
PCNX1-209ENST00000554879 LOC110117498A0A087WWA1 95 aa10.8□□□□□ -0.68
PCNX1-209ENST00000554879 A0A096LNI7 61 aa10.8□□□□□ -0.68
PCNX1-209ENST00000554879 VPREB1P12018 145 aa10.8□□□□□ -0.68
PCNX1-209ENST00000554879 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
PCNX1-209ENST00000554879 A8MU10 97 aa10.78□□□□□ -0.68
PCNX1-209ENST00000554879 LINC00167Q96N53 147 aa10.78□□□□□ -0.68
PCNX1-209ENST00000554879 LIMD2Q9BT23 127 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms