RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HSBP1O75506 76 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 SERF1AO75920 110 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 TRGC2P03986 189 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 RPL13AP40429 203 aaKnown RBP2.43□□□□□ -2.02
VTI1B-203ENST00000554636 RPL28P46779 137 aaKnown RBP2.43□□□□□ -2.02
VTI1B-203ENST00000554636 TSPEAR-AS2P59090 65 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 COX17Q14061 63 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 KRTAP13-3Q3SY46 172 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 FAM19A2Q8N3H0 131 aa2.43□□□□□ -2.02
VTI1B-203ENST00000554636 IGKV2-28A0A075B6P5 120 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 COLCA2A8K830 154 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 TMEM238C9JI98 176 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 IGKV2D-28P01615 120 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 UBE2AP49459 152 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 PRLHP81277 87 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 TMEM126AQ9H061 195 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 FAT4Q6V0I7 4981 aa2.42□□□□□ -2.02
VTI1B-203ENST00000554636 A0A0U1RRA0 63 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 H0Y8G0 127 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 ATP6V1G1O75348 118 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 LEPROTL1O95214 131 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 SMIM13P0DJ93 91 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 LINC00158P58513 81 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 MEIG1Q5JSS6 88 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 MIR7-3HGQ8N6C7 128 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 OCR1Q9BZK8 76 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 ANAPC11Q9NYG5 84 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 NDUFA12Q9UI09 145 aa2.41□□□□□ -2.02
VTI1B-203ENST00000554636 KRTAP4-16G5E9R7 235 aaPredicted RBP2.4□□□□□ -2.03
VTI1B-203ENST00000554636 NCR3O14931 201 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 LEPROTO15243 131 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 CRYGAP11844 174 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 PLNP26678 52 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 SPRR1AP35321 89 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 HERV-K104P63124 156 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 FAM229BQ4G0N7 80 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 FAM19A1Q7Z5A9 133 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 PLEKHB2Q96CS7 222 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 PMCHL2Q9BQD1 86 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 HSPB8Q9UJY1 196 aa2.4□□□□□ -2.03
VTI1B-203ENST00000554636 IGKV2D-26A0A0A0MRZ7 120 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 LOC107984156A0A0G2JMH3 177 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 MYMXA0A1B0GTQ4 84 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 J3QQQ9 107 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BKO60814 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 DPM2O94777 84 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 TSPAN13O95857 204 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 IGKCP01834 107 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BJP06899 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 FABP4P15090 132 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BOP23527 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BBP33778 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BDP58876 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BCP62807 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST2H2BEQ16778 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.39□□□□□ -2.03
VTI1B-203ENST00000554636 ARL17AQ8IVW1 177 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 LINC00337Q8N6G1 96 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 DAND5Q8N907 189 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 LINC00304Q8N9R0 145 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BHQ93079 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 SPRR4Q96PI1 79 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BNQ99877 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 HIST1H2BMQ99879 126 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 KCNQ1DNQ9H478 68 aa2.39□□□□□ -2.03
VTI1B-203ENST00000554636 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 LINC00587B1AMM8 73 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 E9PLD3 99 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 S100A6P06703 90 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 NMUP48645 174 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 HERVK_113P61574 105 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 PRR4Q16378 134 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 SOSTDC1Q6X4U4 206 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 SMCR5Q8TEV8 140 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 HIGD2AQ9BW72 106 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 MAP1LC3CQ9BXW4 147 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 PRO0461Q9UI25 63 aa2.38□□□□□ -2.03
VTI1B-203ENST00000554636 A0A0J9YXY3 114 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 LGALS3P17931 250 aaKnown RBP2.37□□□□□ -2.03
VTI1B-203ENST00000554636 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
VTI1B-203ENST00000554636 SPANXB1Q9NS25 103 aaPredicted RBP2.37□□□□□ -2.03
VTI1B-203ENST00000554636 MUC2Q02817 5179 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 ERC2-IT1O76042 136 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 NDUFC2O95298 119 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 DDTP30046 118 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 COA6Q5JTJ3 125 aaKnown RBP2.36□□□□□ -2.03
VTI1B-203ENST00000554636 RETNLBQ9BQ08 111 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 Q9BRP9 147 aa2.36□□□□□ -2.03
VTI1B-203ENST00000554636 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
VTI1B-203ENST00000554636 TRAV23DV6A0A075B6W5 121 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms