RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 DPM2O94777 84 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 TSPAN13O95857 204 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 NCR2O95944 276 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 NPYP01303 97 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 IGKCP01834 107 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 XCL1P47992 114 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 ORMDL2Q53FV1 153 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 LINC00173Q6ZV60 143 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 SMIM2Q9BVW6 85 aa2.85□□□□□ -1.95
ATXN3-228ENST00000554592 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 SMKR1H3BMG3 65 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 APOMO95445 188 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-228ENST00000554592 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-228ENST00000554592 SS18Q15532 418 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 TMEM101Q96IK0 257 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
ATXN3-228ENST00000554592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-228ENST00000554592 IGKV2-29A2NJV5 120 aaPredicted RBP2.82□□□□□ -1.96
ATXN3-228ENST00000554592 F8VRH5 84 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 H0Y8G0 127 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 NMUP48645 174 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 RPL18AQ02543 176 aaKnown RBP2.82□□□□□ -1.96
ATXN3-228ENST00000554592 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-228ENST00000554592 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 TRBV6-5A0A0K0K1A5 114 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 SDHAF1A6NFY7 115 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 COX7A2LO14548 114 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 HERVK_113P61574 105 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 RPL39LQ96EH5 51 aaKnown RBP2.81□□□□□ -1.96
ATXN3-228ENST00000554592 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 CYSLTR1Q9Y271 337 aa2.81□□□□□ -1.96
ATXN3-228ENST00000554592 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 TRBV27A0A0K0K1C4 114 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 M0QXV9 152 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 CRYGAP11844 174 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 UBE2BP63146 152 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 SMAGPQ0VAQ4 97 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
ATXN3-228ENST00000554592 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-228ENST00000554592 MRPL35Q9NZE8 188 aaKnown RBP2.8□□□□□ -1.96
ATXN3-228ENST00000554592 CHTOPQ9Y3Y2 248 aaKnown RBP2.8□□□□□ -1.96
ATXN3-228ENST00000554592 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 I3L3M4 83 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 TLX1NBP0CAT3 122 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 POLR2KP53803 58 aaKnown RBP2.79□□□□□ -1.96
ATXN3-228ENST00000554592 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-228ENST00000554592 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
ATXN3-228ENST00000554592 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 C5orf38Q86SI9 138 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
ATXN3-228ENST00000554592 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-228ENST00000554592 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 NDUFA1O15239 70 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 SEC61GP60059 68 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-228ENST00000554592 CSDC2Q9Y534 153 aaKnown RBP2.77□□□□□ -1.97
ATXN3-228ENST00000554592 TRAV13-1A0A0B4J241 112 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 ZNF815PA8K554 130 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 A8MU10 97 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 LEPROTO15243 131 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
ATXN3-228ENST00000554592 RPL39P62891 51 aaKnown RBP2.76□□□□□ -1.97
ATXN3-228ENST00000554592 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
ATXN3-228ENST00000554592 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms