RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
SCFD1-211ENST00000554437 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
SCFD1-211ENST00000554437 CPS1P31327 1500 aa1.15□□□□□ -2.22
SCFD1-211ENST00000554437 NDUFA3O95167 84 aa1.15□□□□□ -2.23
SCFD1-211ENST00000554437 FCER1GP30273 86 aa1.15□□□□□ -2.23
SCFD1-211ENST00000554437 MEGF8Q7Z7M0 2845 aa1.14□□□□□ -2.23
SCFD1-211ENST00000554437 H1FX-AS1Q4G0G2 97 aa1.14□□□□□ -2.23
SCFD1-211ENST00000554437 FXYD6Q9H0Q3 95 aa1.14□□□□□ -2.23
SCFD1-211ENST00000554437 ZNF462Q96JM2 2506 aa1.14□□□□□ -2.23
SCFD1-211ENST00000554437 CACNA1EQ15878 2313 aa1.14□□□□□ -2.23
SCFD1-211ENST00000554437 MAST1Q9Y2H9 1570 aa1.13□□□□□ -2.23
SCFD1-211ENST00000554437 DDX60LQ5H9U9 1706 aaKnown RBP1.12□□□□□ -2.23
SCFD1-211ENST00000554437 LELP1Q5T871 98 aa1.12□□□□□ -2.23
SCFD1-211ENST00000554437 PRO3102Q9H379 93 aa1.12□□□□□ -2.23
SCFD1-211ENST00000554437 PIEZO2Q9H5I5 2752 aa1.11□□□□□ -2.23
SCFD1-211ENST00000554437 K7EMI3 77 aa1.1□□□□□ -2.23
SCFD1-211ENST00000554437 SPINK4O60575 86 aa1.1□□□□□ -2.23
SCFD1-211ENST00000554437 CRIP1P50238 77 aa1.1□□□□□ -2.23
SCFD1-211ENST00000554437 NMES1Q9C002 83 aa1.1□□□□□ -2.23
SCFD1-211ENST00000554437 RNF17Q9BXT8 1623 aaKnown RBP1.1□□□□□ -2.23
SCFD1-211ENST00000554437 TJP1Q07157 1748 aa1.09□□□□□ -2.23
SCFD1-211ENST00000554437 LINC00158P58513 81 aa1.09□□□□□ -2.23
SCFD1-211ENST00000554437 SERF2P84101 59 aa1.09□□□□□ -2.23
SCFD1-211ENST00000554437 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
SCFD1-211ENST00000554437 NCBP2-AS2Q69YL0 99 aa1.09□□□□□ -2.23
SCFD1-211ENST00000554437 UGGT1Q9NYU2 1555 aa1.08□□□□□ -2.24
SCFD1-211ENST00000554437 M0R1W7 72 aa1.08□□□□□ -2.24
SCFD1-211ENST00000554437 WFDC13Q8IUB5 93 aa1.08□□□□□ -2.24
SCFD1-211ENST00000554437 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
SCFD1-211ENST00000554437 SYCP2Q9BX26 1530 aa1.08□□□□□ -2.24
SCFD1-211ENST00000554437 CACNA1HO95180 2353 aa1.07□□□□□ -2.24
SCFD1-211ENST00000554437 C3P01024 1663 aa1.07□□□□□ -2.24
SCFD1-211ENST00000554437 TTC28Q96AY4 2481 aa1.07□□□□□ -2.24
SCFD1-211ENST00000554437 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
SCFD1-211ENST00000554437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.248e-15■■■■■ 26.8
SCFD1-211ENST00000554437 LY75O60449 1722 aa1.06□□□□□ -2.24
SCFD1-211ENST00000554437 USF3Q68DE3 2245 aa1.06□□□□□ -2.24
SCFD1-211ENST00000554437 DEFB109BQ30KR1 87 aa1.06□□□□□ -2.24
SCFD1-211ENST00000554437 DOPEY2Q9Y3R5 2298 aa1.06□□□□□ -2.24
SCFD1-211ENST00000554437 PLCE1Q9P212 2302 aa1.06□□□□□ -2.24
SCFD1-211ENST00000554437 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
SCFD1-211ENST00000554437 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
SCFD1-211ENST00000554437 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
SCFD1-211ENST00000554437 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
SCFD1-211ENST00000554437 TNCP24821 2201 aa1.04□□□□□ -2.24
SCFD1-211ENST00000554437 KIF1AQ12756 1690 aa1.04□□□□□ -2.24
SCFD1-211ENST00000554437 PTPRQQ9UMZ3 2332 aa1.04□□□□□ -2.24
SCFD1-211ENST00000554437 FANCD2Q9BXW9 1451 aa1.04□□□□□ -2.24
SCFD1-211ENST00000554437 SPTBN2O15020 2390 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 SNRPGP15A8MWD9 76 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 H0YAA0 97 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 MROH2AA6NES4 1674 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 CROCC2H7BZ55 1655 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 ITSN2Q9NZM3 1697 aa1.03□□□□□ -2.24
SCFD1-211ENST00000554437 PTPRZ1P23471 2315 aaPredicted RBP1.03□□□□□ -2.25
SCFD1-211ENST00000554437 IGIPA6NJ69 53 aa1.02□□□□□ -2.25
SCFD1-211ENST00000554437 C4AP0C0L4 1744 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 C4BP0C0L5 1744 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 DEPDC5O75140 1603 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 CLASP1Q7Z460 1538 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 POLQO75417 2590 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 LYNX1G3V0Z9 82 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
SCFD1-211ENST00000554437 ADCY10Q96PN6 1610 aa0.99□□□□□ -2.25
SCFD1-211ENST00000554437 CNOT1A5YKK6 2376 aaKnown RBP0.99□□□□□ -2.25
SCFD1-211ENST00000554437 KIAA0586Q9BVV6 1533 aa0.98□□□□□ -2.25
SCFD1-211ENST00000554437 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-211ENST00000554437 ZNF292O60281 2723 aa0.98□□□□□ -2.25
SCFD1-211ENST00000554437 CHD9Q3L8U1 2897 aa0.97□□□□□ -2.25
SCFD1-211ENST00000554437 NOTCH1P46531 2555 aa0.97□□□□□ -2.25
SCFD1-211ENST00000554437 SPINK1P00995 79 aa0.97□□□□□ -2.25
SCFD1-211ENST00000554437 PLNP26678 52 aa0.97□□□□□ -2.25
SCFD1-211ENST00000554437 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
SCFD1-211ENST00000554437 LOC730098B7Z3J9 87 aa0.96□□□□□ -2.26
SCFD1-211ENST00000554437 IAPPP10997 89 aa0.96□□□□□ -2.26
SCFD1-211ENST00000554437 MINOS1Q5TGZ0 78 aa0.96□□□□□ -2.26
SCFD1-211ENST00000554437 CMC2Q9NRP2 79 aa0.96□□□□□ -2.26
SCFD1-211ENST00000554437 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
SCFD1-211ENST00000554437 EFCAB6Q5THR3 1501 aa0.95□□□□□ -2.26
SCFD1-211ENST00000554437 BDP1A6H8Y1 2624 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 H0YGX0 51 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 PRH1P02810 166 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 DEFB130BP0DP73 79 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 DEFB130AP0DP74 79 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 SMR3AQ99954 134 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 AGLP35573 1532 aa0.94□□□□□ -2.26
SCFD1-211ENST00000554437 SPTBN1Q01082 2364 aaKnown RBP0.93□□□□□ -2.26
SCFD1-211ENST00000554437 F8P00451 2351 aa0.92□□□□□ -2.26
SCFD1-211ENST00000554437 FBN2P35556 2912 aa0.92□□□□□ -2.26
SCFD1-211ENST00000554437 TMEM167BQ9NRX6 74 aa0.91□□□□□ -2.26
SCFD1-211ENST00000554437 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
SCFD1-211ENST00000554437 ABCC8Q09428 1581 aa0.91□□□□□ -2.26
SCFD1-211ENST00000554437 PIEZO1Q92508 2521 aa0.9□□□□□ -2.26
SCFD1-211ENST00000554437 U3KQA8 63 aa0.89□□□□□ -2.27
SCFD1-211ENST00000554437 ANK2Q01484 3957 aa0.89□□□□□ -2.27
SCFD1-211ENST00000554437 FRAS1Q86XX4 4008 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms