RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 FAT3Q8TDW7 4589 aa11.19□□□□□ -0.62
PSEN1-210ENST00000554131 TRAV23DV6A0A075B6W5 121 aa11.18□□□□□ -0.62
PSEN1-210ENST00000554131 OR13C6PQ8NH95 151 aa11.18□□□□□ -0.62
PSEN1-210ENST00000554131 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
PSEN1-210ENST00000554131 HSD52Q0P140 79 aa11.17□□□□□ -0.62
PSEN1-210ENST00000554131 FXYD2P54710 66 aa11.16□□□□□ -0.62
PSEN1-210ENST00000554131 PRLHP81277 87 aa11.16□□□□□ -0.62
PSEN1-210ENST00000554131 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
PSEN1-210ENST00000554131 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
PSEN1-210ENST00000554131 H0Y9J4 135 aa11.15□□□□□ -0.62
PSEN1-210ENST00000554131 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-210ENST00000554131 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
PSEN1-210ENST00000554131 CFC1P0CG37 223 aa11.15□□□□□ -0.62
PSEN1-210ENST00000554131 A6NDN8 102 aa11.14□□□□□ -0.63
PSEN1-210ENST00000554131 B5MCH6 92 aa11.14□□□□□ -0.63
PSEN1-210ENST00000554131 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
PSEN1-210ENST00000554131 UBE2AP49459 152 aa11.13□□□□□ -0.63
PSEN1-210ENST00000554131 DIRC1Q969H9 104 aa11.12□□□□□ -0.63
PSEN1-210ENST00000554131 CBY1Q9Y3M2 126 aa11.12□□□□□ -0.63
PSEN1-210ENST00000554131 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
PSEN1-210ENST00000554131 ETDCA0A1B0GVM5 59 aa11.11□□□□□ -0.63
PSEN1-210ENST00000554131 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-210ENST00000554131 Q6ZRX8 168 aa11.1□□□□□ -0.63
PSEN1-210ENST00000554131 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
PSEN1-210ENST00000554131 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
PSEN1-210ENST00000554131 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
PSEN1-210ENST00000554131 C6orf99Q4VX62 202 aa11.09□□□□□ -0.63
PSEN1-210ENST00000554131 SMCR5Q8TEV8 140 aa11.09□□□□□ -0.63
PSEN1-210ENST00000554131 Q9BRP9 147 aa11.09□□□□□ -0.63
PSEN1-210ENST00000554131 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
PSEN1-210ENST00000554131 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
PSEN1-210ENST00000554131 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
PSEN1-210ENST00000554131 A6NJY4 79 aa11.07□□□□□ -0.64
PSEN1-210ENST00000554131 CTAG1AP78358 180 aa11.07□□□□□ -0.64
PSEN1-210ENST00000554131 BVES-AS1Q5T3Y7 98 aa11.07□□□□□ -0.64
PSEN1-210ENST00000554131 TRBV7-6A0A0J9YX20 115 aa11.06□□□□□ -0.64
PSEN1-210ENST00000554131 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
PSEN1-210ENST00000554131 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
PSEN1-210ENST00000554131 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
PSEN1-210ENST00000554131 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
PSEN1-210ENST00000554131 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
PSEN1-210ENST00000554131 COX7BP24311 80 aa11.03□□□□□ -0.64
PSEN1-210ENST00000554131 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-210ENST00000554131 K7ERJ3 54 aa11.02□□□□□ -0.65
PSEN1-210ENST00000554131 PRO1854Q9UHT4 67 aa11.02□□□□□ -0.65
PSEN1-210ENST00000554131 TNXBP22105 4242 aa11.01□□□□□ -0.65
PSEN1-210ENST00000554131 OXTP01178 125 aa11.01□□□□□ -0.65
PSEN1-210ENST00000554131 HINT1P49773 126 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-210ENST00000554131 LINC01600Q96MT4 127 aa11.01□□□□□ -0.65
PSEN1-210ENST00000554131 H7C2G1 150 aa10.99□□□□□ -0.65
PSEN1-210ENST00000554131 MT1HL1P0DM35 61 aa10.99□□□□□ -0.65
PSEN1-210ENST00000554131 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
PSEN1-210ENST00000554131 M0R143 59 aa10.97□□□□□ -0.65
PSEN1-210ENST00000554131 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
PSEN1-210ENST00000554131 ANAPC11Q9NYG5 84 aa10.96□□□□□ -0.65
PSEN1-210ENST00000554131 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
PSEN1-210ENST00000554131 ST20-AS1Q8NBB2 130 aa10.94□□□□□ -0.66
PSEN1-210ENST00000554131 A0A087X002 238 aa10.93□□□□□ -0.66
PSEN1-210ENST00000554131 TSPAN13O95857 204 aa10.93□□□□□ -0.66
PSEN1-210ENST00000554131 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
PSEN1-210ENST00000554131 LINC00575Q6W349 94 aa10.93□□□□□ -0.66
PSEN1-210ENST00000554131 PRR26Q8N8Z3 221 aa10.93□□□□□ -0.66
PSEN1-210ENST00000554131 VAMP3Q15836 100 aa10.92□□□□□ -0.66
PSEN1-210ENST00000554131 ZNF706Q9Y5V0 76 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-210ENST00000554131 TRIAP1O43715 76 aa10.91□□□□□ -0.66
PSEN1-210ENST00000554131 Q1RN00 199 aa10.91□□□□□ -0.66
PSEN1-210ENST00000554131 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
PSEN1-210ENST00000554131 KRTAP13-2Q52LG2 175 aa10.9□□□□□ -0.66
PSEN1-210ENST00000554131 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-210ENST00000554131 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
PSEN1-210ENST00000554131 FAM218AQ96MZ4 157 aa10.88□□□□□ -0.67
PSEN1-210ENST00000554131 SPRR1BP22528 89 aa10.87□□□□□ -0.67
PSEN1-210ENST00000554131 H0YGX0 51 aa10.86□□□□□ -0.67
PSEN1-210ENST00000554131 CRYGAP11844 174 aa10.86□□□□□ -0.67
PSEN1-210ENST00000554131 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
PSEN1-210ENST00000554131 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
PSEN1-210ENST00000554131 BATFQ16520 125 aa10.84□□□□□ -0.67
PSEN1-210ENST00000554131 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
PSEN1-210ENST00000554131 J3QL48 77 aa10.83□□□□□ -0.68
PSEN1-210ENST00000554131 SLC25A20O43772 301 aa10.83□□□□□ -0.68
PSEN1-210ENST00000554131 SNHG12Q9BXW3 62 aa10.82□□□□□ -0.68
PSEN1-210ENST00000554131 PSMB2P49721 201 aa10.81□□□□□ -0.68
PSEN1-210ENST00000554131 Q6ZQY7 126 aa10.81□□□□□ -0.68
PSEN1-210ENST00000554131 Q8N377 158 aa10.81□□□□□ -0.68
PSEN1-210ENST00000554131 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
PSEN1-210ENST00000554131 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
PSEN1-210ENST00000554131 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-210ENST00000554131 HERC1Q15751 4861 aa10.79□□□□□ -0.68
PSEN1-210ENST00000554131 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
PSEN1-210ENST00000554131 A0A1B0GX51 115 aa10.79□□□□□ -0.68
PSEN1-210ENST00000554131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-210ENST00000554131 DEFB105AQ8NG35 78 aa10.79□□□□□ -0.68
PSEN1-210ENST00000554131 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
PSEN1-210ENST00000554131 NAA38Q9BRA0 125 aaKnown RBP10.78□□□□□ -0.68
PSEN1-210ENST00000554131 COX6CP09669 75 aa10.77□□□□□ -0.69
PSEN1-210ENST00000554131 PCP4L1A6NKN8 68 aa10.76□□□□□ -0.69
PSEN1-210ENST00000554131 TAX1BP3O14907 124 aa10.76□□□□□ -0.69
PSEN1-210ENST00000554131 IGLV9-49A0A0B4J1Y8 123 aa10.74□□□□□ -0.69
PSEN1-210ENST00000554131 LST1O00453 97 aa10.73□□□□□ -0.69
PSEN1-210ENST00000554131 MOBPQ13875 183 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms