RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GVQW2A0A096LPI5 108 aaPredicted RBP6.21□□□□□ -1.42
SIX4-202ENST00000554079 CYSRT1A8MQ03 144 aa6.21□□□□□ -1.42
SIX4-202ENST00000554079 MDFIQ99750 246 aa6.21□□□□□ -1.42
SIX4-202ENST00000554079 USP9XQ93008 2570 aaPredicted RBP6.21□□□□□ -1.42
SIX4-202ENST00000554079 LRRK2Q5S007 2527 aa6.21□□□□□ -1.42
SIX4-202ENST00000554079 SPINK7P58062 85 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 Q8NBF4 154 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 CSNK1G2-AS1Q8NCQ2 148 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 SPRR4Q96PI1 79 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 H3BPC8 53 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 TNP2Q05952 138 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 XAGE1AQ9HD64 81 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
SIX4-202ENST00000554079 CRYBG3Q68DQ2 2970 aa6.19□□□□□ -1.42
SIX4-202ENST00000554079 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
SIX4-202ENST00000554079 UTP20O75691 2785 aaKnown RBP6.19□□□□□ -1.42
SIX4-202ENST00000554079 USP9YO00507 2555 aaPredicted RBP6.19□□□□□ -1.42
SIX4-202ENST00000554079 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
SIX4-202ENST00000554079 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
SIX4-202ENST00000554079 H0Y9P7 68 aa6.18□□□□□ -1.42
SIX4-202ENST00000554079 FSHBP01225 129 aa6.17□□□□□ -1.42
SIX4-202ENST00000554079 REG3AQ06141 175 aa6.17□□□□□ -1.42
SIX4-202ENST00000554079 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
SIX4-202ENST00000554079 GYPEP15421 78 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
SIX4-202ENST00000554079 C1orf137Q5JT78 98 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 PTPN13Q12923 2485 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 HECTD1Q9ULT8 2610 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 FLNBO75369 2602 aaKnown RBP6.16□□□□□ -1.42
SIX4-202ENST00000554079 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
SIX4-202ENST00000554079 DEFB112Q30KQ8 113 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
SIX4-202ENST00000554079 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
SIX4-202ENST00000554079 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
SIX4-202ENST00000554079 WFDC13Q8IUB5 93 aa6.15□□□□□ -1.42
SIX4-202ENST00000554079 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.42
SIX4-202ENST00000554079 IGLV7-46A0A075B6I9 117 aa6.14□□□□□ -1.43
SIX4-202ENST00000554079 ANGP03950 147 aaKnown RBP6.14□□□□□ -1.43
SIX4-202ENST00000554079 ZNF702PQ9H963 129 aa6.14□□□□□ -1.43
SIX4-202ENST00000554079 SETXQ7Z333 2677 aaKnown RBP6.14□□□□□ -1.43
SIX4-202ENST00000554079 CELSR2Q9HCU4 2923 aa6.14□□□□□ -1.43
SIX4-202ENST00000554079 Q8NAQ8 132 aa6.13□□□□□ -1.43
SIX4-202ENST00000554079 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
SIX4-202ENST00000554079 SPAG11AQ6PDA7 123 aa6.13□□□□□ -1.43
SIX4-202ENST00000554079 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
SIX4-202ENST00000554079 A0A096LPF7 62 aa6.12□□□□□ -1.43
SIX4-202ENST00000554079 CREBBPQ92793 2442 aa6.12□□□□□ -1.43
SIX4-202ENST00000554079 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
SIX4-202ENST00000554079 WFDC10BQ8IUB3 73 aa6.1□□□□□ -1.43
SIX4-202ENST00000554079 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
SIX4-202ENST00000554079 CENPEQ02224 2701 aa6.09□□□□□ -1.43
SIX4-202ENST00000554079 UNC79Q9P2D8 2635 aa6.09□□□□□ -1.43
SIX4-202ENST00000554079 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
SIX4-202ENST00000554079 MSMBP08118 114 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 IGLV1-50A0A075B6I6 118 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 DEFB130BP0DP73 79 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 DEFB130AP0DP74 79 aa6.08□□□□□ -1.44
SIX4-202ENST00000554079 SPG11Q96JI7 2443 aa6.07□□□□□ -1.44
SIX4-202ENST00000554079 B4DSR2 109 aa6.07□□□□□ -1.44
SIX4-202ENST00000554079 RTL8CO15255 209 aa6.07□□□□□ -1.44
SIX4-202ENST00000554079 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
SIX4-202ENST00000554079 A0A087X002 238 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 PRO0255Q9UI72 69 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 APCP25054 2843 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 ITPR2Q14571 2701 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 DHRS4-AS1Q9P1J3 65 aa6.06□□□□□ -1.44
SIX4-202ENST00000554079 FBN2P35556 2912 aa6.05□□□□□ -1.44
SIX4-202ENST00000554079 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
SIX4-202ENST00000554079 Q6ZRX8 168 aa6.04□□□□□ -1.44
SIX4-202ENST00000554079 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
SIX4-202ENST00000554079 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
SIX4-202ENST00000554079 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 CCL19Q99731 98 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 C19orf73Q9NVV2 129 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 CSPG4Q6UVK1 2322 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 NOTCH2Q04721 2471 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 HRES1P13985 223 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 CAMK2N2Q96S95 79 aa6.03□□□□□ -1.44
SIX4-202ENST00000554079 ABCA12Q86UK0 2595 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 IGLV1-51P01701 117 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 DEFB113Q30KQ7 82 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 OTOGQ6ZRI0 2925 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 PDZD2O15018 2839 aa6.02□□□□□ -1.45
SIX4-202ENST00000554079 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
SIX4-202ENST00000554079 NAV2Q8IVL1 2488 aa6.01□□□□□ -1.45
SIX4-202ENST00000554079 PCOTHQ58A44 107 aa6.01□□□□□ -1.45
SIX4-202ENST00000554079 MAST4O15021 2626 aa6.01□□□□□ -1.45
SIX4-202ENST00000554079 ANKRD17O75179 2603 aaKnown RBP6.01□□□□□ -1.45
SIX4-202ENST00000554079 A0A0G2JQZ4 141 aa6□□□□□ -1.45
SIX4-202ENST00000554079 A0A1W2PNN7 141 aa6□□□□□ -1.45
SIX4-202ENST00000554079 CMC4P56277 68 aaPredicted RBP6□□□□□ -1.45
SIX4-202ENST00000554079 IGFL1Q6UW32 110 aa6□□□□□ -1.45
SIX4-202ENST00000554079 SPRR1AP35321 89 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms