RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NKAPP1Q8N9T2 125 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 ST20-AS1Q8NBB2 130 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 VCX2Q9H322 139 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 CYSLTR1Q9Y271 337 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 TAGLN2P37802 199 aaKnown RBP1.61□□□□□ -2.15
SLIRP-202ENST00000553981 CXCL5P42830 114 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 RPS29P62273 56 aaKnown RBP1.61□□□□□ -2.15
SLIRP-202ENST00000553981 SMAGPQ0VAQ4 97 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 TIMM17AQ99595 171 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 C2orf88Q9BSF0 95 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 MAP1LC3AQ9H492 121 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 CST9LQ9H4G1 147 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 NAT8Q9UHE5 227 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 ERG28Q9UKR5 140 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
SLIRP-202ENST00000553981 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
SLIRP-202ENST00000553981 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 A0A1B0GVG6 124 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 C11orf86A6NJI1 115 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 M0R2T5 61 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 NCR3O14931 201 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 PPBPP02775 128 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 IGLC3P0DOY3 106 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
SLIRP-202ENST00000553981 HRCT1Q6UXD1 115 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 SSBP3-AS1Q7Z2R9 100 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 ERASQ7Z444 233 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 KCNQ1DNQ9H478 68 aa1.6□□□□□ -2.15
SLIRP-202ENST00000553981 GEMIN7Q9H840 131 aaKnown RBP1.6□□□□□ -2.15
SLIRP-202ENST00000553981 A0A1B0GW15 77 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 F8W036 122 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 SLC25A20O43772 301 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 SMIM13P0DJ93 91 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 TSPEAR-AS2P59090 65 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 ORMDL2Q53FV1 153 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 SOSTDC1Q6X4U4 206 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 ATP5L2Q7Z4Y8 100 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 GNB1LQ9BYB4 327 aa1.59□□□□□ -2.15
SLIRP-202ENST00000553981 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.16
SLIRP-202ENST00000553981 H7C2G1 150 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 PMVKQ15126 192 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 PMCHL1Q16048 86 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 C1orf195Q5TG92 126 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 MIR7-3HGQ8N6C7 128 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
SLIRP-202ENST00000553981 TMEM223A0PJW6 202 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 ATP5LO75964 103 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 LINC00158P58513 81 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 SEC11AP67812 179 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 COX17Q14061 63 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 PET117Q6UWS5 81 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 AKAP14Q86UN6 197 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 BOD1L2Q8IYS8 172 aa1.57□□□□□ -2.16
SLIRP-202ENST00000553981 NXT2Q9NPJ8 142 aaKnown RBP1.57□□□□□ -2.16
SLIRP-202ENST00000553981 LOC107984156A0A0G2JMH3 177 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 ETDCA0A1B0GVM5 59 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 K7EMI3 77 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 S100A8P05109 93 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 SPRR1BP22528 89 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 Q1RN00 199 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 C9orf153Q5TBE3 101 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 Q6Q795 121 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 COX6B2Q6YFQ2 88 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 Q6ZRX8 168 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 ARL17AQ8IVW1 177 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 OCR1Q9BZK8 76 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 DHRS4-AS1Q9P1J3 65 aa1.56□□□□□ -2.16
SLIRP-202ENST00000553981 ZNF706Q9Y5V0 76 aaPredicted RBP1.56□□□□□ -2.16
SLIRP-202ENST00000553981 PEA15Q15121 130 aa1.55□□□□□ -2.16
SLIRP-202ENST00000553981 TMEM170BQ5T4T1 132 aa1.55□□□□□ -2.16
SLIRP-202ENST00000553981 BAGE3Q86Y29 109 aa1.55□□□□□ -2.16
SLIRP-202ENST00000553981 FAM19A2Q8N3H0 131 aa1.55□□□□□ -2.16
SLIRP-202ENST00000553981 C18orf32Q8TCD1 76 aa1.55□□□□□ -2.16
SLIRP-202ENST00000553981 TRAV9-1A0A075B6T8 112 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 H3BRM9 83 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 DDTP30046 118 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 NDUFA6P56556 154 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 NPC2P61916 151 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 NDUFA12Q9UI09 145 aa1.54□□□□□ -2.16
SLIRP-202ENST00000553981 MEIG1Q5JSS6 88 aa1.53□□□□□ -2.16
SLIRP-202ENST00000553981 Q5XG85 94 aa1.53□□□□□ -2.16
SLIRP-202ENST00000553981 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 TRBV10-2A0A0K0K1G8 114 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 ZNF73O43830 326 aaPredicted RBP1.52□□□□□ -2.17
SLIRP-202ENST00000553981 HBDP02042 147 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 LINC00614P0C842 121 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 HRES1P13985 223 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 KRTAP10-10P60014 251 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 IFITM2Q01629 132 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 FABP9Q0Z7S8 132 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 FA2HQ7L5A8 372 aa1.52□□□□□ -2.17
SLIRP-202ENST00000553981 TRAV12-1A0A0B4J245 112 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 NDUFC2O95298 119 aa1.51□□□□□ -2.17
SLIRP-202ENST00000553981 MT-ND4LP03901 98 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms