RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 H3BUT2 72 aa9.18□□□□□ -0.94
SHMT2-208ENST00000553868 COX6CP09669 75 aa9.18□□□□□ -0.94
SHMT2-208ENST00000553868 Q8NDZ9 215 aa9.18□□□□□ -0.94
SHMT2-208ENST00000553868 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
SHMT2-208ENST00000553868 LINC01620Q4KN68 170 aa9.17□□□□□ -0.94
SHMT2-208ENST00000553868 KRTAP9-6A0A140TA67 174 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 OXTP01178 125 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 FABP2P12104 132 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 FAM19A5Q7Z5A7 132 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-208ENST00000553868 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 DPH3Q96FX2 82 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 TNXBP22105 4242 aa9.16□□□□□ -0.94
SHMT2-208ENST00000553868 A0A1W2PPM0 123 aa9.15□□□□□ -0.94
SHMT2-208ENST00000553868 IGLV6-57P01721 117 aa9.15□□□□□ -0.94
SHMT2-208ENST00000553868 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
SHMT2-208ENST00000553868 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
SHMT2-208ENST00000553868 SMIM11BQ8TCY0 68 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
SHMT2-208ENST00000553868 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
SHMT2-208ENST00000553868 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
SHMT2-208ENST00000553868 M0QXV9 152 aa9.13□□□□□ -0.95
SHMT2-208ENST00000553868 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
SHMT2-208ENST00000553868 TRIAP1O43715 76 aa9.12□□□□□ -0.95
SHMT2-208ENST00000553868 VAMP3Q15836 100 aa9.12□□□□□ -0.95
SHMT2-208ENST00000553868 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
SHMT2-208ENST00000553868 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
SHMT2-208ENST00000553868 GAGE10A6NGK3 116 aa9.11□□□□□ -0.95
SHMT2-208ENST00000553868 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
SHMT2-208ENST00000553868 A0A1B0GV90 55 aa9.1□□□□□ -0.95
SHMT2-208ENST00000553868 H0YGX0 51 aa9.1□□□□□ -0.95
SHMT2-208ENST00000553868 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
SHMT2-208ENST00000553868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-208ENST00000553868 PRYO14603 147 aa9.09□□□□□ -0.95
SHMT2-208ENST00000553868 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-208ENST00000553868 GTF2H5Q6ZYL4 71 aa9.09□□□□□ -0.95
SHMT2-208ENST00000553868 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
SHMT2-208ENST00000553868 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
SHMT2-208ENST00000553868 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
SHMT2-208ENST00000553868 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
SHMT2-208ENST00000553868 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
SHMT2-208ENST00000553868 A0A087WYN8 130 aa9.07□□□□□ -0.96
SHMT2-208ENST00000553868 PANO1I0J062 215 aa9.07□□□□□ -0.96
SHMT2-208ENST00000553868 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-208ENST00000553868 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
SHMT2-208ENST00000553868 PLAC8Q9NZF1 115 aa9.07□□□□□ -0.96
SHMT2-208ENST00000553868 TRBV7-6A0A0J9YX20 115 aa9.06□□□□□ -0.96
SHMT2-208ENST00000553868 RPL37AP8A6NKH3 93 aa9.06□□□□□ -0.96
SHMT2-208ENST00000553868 K7EP34 96 aa9.06□□□□□ -0.96
SHMT2-208ENST00000553868 SNCGO76070 127 aa9.06□□□□□ -0.96
SHMT2-208ENST00000553868 UBE2BP63146 152 aa9.06□□□□□ -0.96
SHMT2-208ENST00000553868 ATXN8Q156A1 80 aa9.05□□□□□ -0.96
SHMT2-208ENST00000553868 PHF5AQ7RTV0 110 aaKnown RBP9.04□□□□□ -0.96
SHMT2-208ENST00000553868 COX7BP24311 80 aa9.03□□□□□ -0.96
SHMT2-208ENST00000553868 Q6ZSA8 131 aa9.03□□□□□ -0.96
SHMT2-208ENST00000553868 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
SHMT2-208ENST00000553868 A0A1B0GX51 115 aa9.02□□□□□ -0.97
SHMT2-208ENST00000553868 TCL1BO95988 128 aa9.02□□□□□ -0.97
SHMT2-208ENST00000553868 MT1HL1P0DM35 61 aa9.02□□□□□ -0.97
SHMT2-208ENST00000553868 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
SHMT2-208ENST00000553868 LST1O00453 97 aa9.01□□□□□ -0.97
SHMT2-208ENST00000553868 SLC25A20O43772 301 aa9.01□□□□□ -0.97
SHMT2-208ENST00000553868 SPRR1AP35321 89 aa9.01□□□□□ -0.97
SHMT2-208ENST00000553868 CLEC2BQ92478 149 aa9.01□□□□□ -0.97
SHMT2-208ENST00000553868 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
SHMT2-208ENST00000553868 UBE2V1Q13404 147 aa9□□□□□ -0.97
SHMT2-208ENST00000553868 DNAL4O96015 105 aa8.99□□□□□ -0.97
SHMT2-208ENST00000553868 TRACP01848 142 aa8.99□□□□□ -0.97
SHMT2-208ENST00000553868 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
SHMT2-208ENST00000553868 H3BMG7 143 aa8.98□□□□□ -0.97
SHMT2-208ENST00000553868 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
SHMT2-208ENST00000553868 SCXQ7RTU7 201 aa8.97□□□□□ -0.97
SHMT2-208ENST00000553868 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
SHMT2-208ENST00000553868 hADV29S1A0JD25 119 aa8.96□□□□□ -0.98
SHMT2-208ENST00000553868 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-208ENST00000553868 Q6ZRX8 168 aa8.96□□□□□ -0.98
SHMT2-208ENST00000553868 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.98
SHMT2-208ENST00000553868 DHRS4-AS1Q9P1J3 65 aa8.96□□□□□ -0.98
SHMT2-208ENST00000553868 B5MCH6 92 aa8.95□□□□□ -0.98
SHMT2-208ENST00000553868 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
SHMT2-208ENST00000553868 C9JAW5 83 aa8.94□□□□□ -0.98
SHMT2-208ENST00000553868 BCE1O60756 84 aa8.94□□□□□ -0.98
SHMT2-208ENST00000553868 GHRHP01286 108 aa8.94□□□□□ -0.98
SHMT2-208ENST00000553868 H0Y9J4 135 aa8.93□□□□□ -0.98
SHMT2-208ENST00000553868 LPAP08519 4548 aa8.92□□□□□ -0.98
SHMT2-208ENST00000553868 F8W1H4 67 aa8.92□□□□□ -0.98
SHMT2-208ENST00000553868 H3BQ85 93 aa8.92□□□□□ -0.98
SHMT2-208ENST00000553868 UBE2AP49459 152 aa8.92□□□□□ -0.98
SHMT2-208ENST00000553868 OCIAD2Q56VL3 154 aa8.91□□□□□ -0.98
SHMT2-208ENST00000553868 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-208ENST00000553868 KRTAP11-1Q8IUC1 163 aa8.91□□□□□ -0.98
SHMT2-208ENST00000553868 H3BT86 120 aa8.9□□□□□ -0.98
SHMT2-208ENST00000553868 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.98
SHMT2-208ENST00000553868 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
SHMT2-208ENST00000553868 MUC2Q02817 5179 aa8.88□□□□□ -0.99
SHMT2-208ENST00000553868 PRLHP81277 87 aa8.88□□□□□ -0.99
SHMT2-208ENST00000553868 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms