RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MYCBP2O75592 4640 aa5.09□□□□□ -1.59
PSEN1-209ENST00000553855 H0Y9J4 135 aa5.09□□□□□ -1.59
PSEN1-209ENST00000553855 LINC01600Q96MT4 127 aa5.09□□□□□ -1.59
PSEN1-209ENST00000553855 C12orf57Q99622 126 aa5.09□□□□□ -1.59
PSEN1-209ENST00000553855 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 HSBP1L1C9JCN9 74 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 FAM19A1Q7Z5A9 133 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 HIST3H2BBQ8N257 126 aa5.08□□□□□ -1.6
PSEN1-209ENST00000553855 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 ZNF815PA8K554 130 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 NCR3O14931 201 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 SCGB1D4Q6XE38 83 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
PSEN1-209ENST00000553855 S100A7L2Q5SY68 101 aa5.06□□□□□ -1.6
PSEN1-209ENST00000553855 DAND5Q8N907 189 aa5.06□□□□□ -1.6
PSEN1-209ENST00000553855 TMEM126AQ9H061 195 aa5.06□□□□□ -1.6
PSEN1-209ENST00000553855 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
PSEN1-209ENST00000553855 TIMM17BO60830 172 aa5.05□□□□□ -1.6
PSEN1-209ENST00000553855 RPL13AP40429 203 aaKnown RBP5.05□□□□□ -1.6
PSEN1-209ENST00000553855 HIST1H2BLQ99880 126 aa5.05□□□□□ -1.6
PSEN1-209ENST00000553855 SPANXB1Q9NS25 103 aaPredicted RBP5.05□□□□□ -1.6
PSEN1-209ENST00000553855 FAT3Q8TDW7 4589 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 TRBV10-2A0A0K0K1G8 114 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 TMEM238C9JI98 176 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 NDUFC2O95298 119 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 DDTP30046 118 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 NPC2P61916 151 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
PSEN1-209ENST00000553855 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
PSEN1-209ENST00000553855 HINT1P49773 126 aaPredicted RBP5.03□□□□□ -1.6
PSEN1-209ENST00000553855 PRLHP81277 87 aa5.03□□□□□ -1.6
PSEN1-209ENST00000553855 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
PSEN1-209ENST00000553855 HIGD2AQ9BW72 106 aa5.03□□□□□ -1.6
PSEN1-209ENST00000553855 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
PSEN1-209ENST00000553855 PKHD1L1Q86WI1 4243 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 PYY3Q5JQD4 70 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 Q8NDZ9 215 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 OR13C6PQ8NH95 151 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 SPANXCQ9NY87 97 aa5.02□□□□□ -1.61
PSEN1-209ENST00000553855 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
PSEN1-209ENST00000553855 CRYGAP11844 174 aa5.01□□□□□ -1.61
PSEN1-209ENST00000553855 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
PSEN1-209ENST00000553855 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
PSEN1-209ENST00000553855 Q6ZVH6 145 aa5.01□□□□□ -1.61
PSEN1-209ENST00000553855 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
PSEN1-209ENST00000553855 IFITM1P13164 125 aa5□□□□□ -1.61
PSEN1-209ENST00000553855 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
PSEN1-209ENST00000553855 TRAV23DV6A0A075B6W5 121 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 PCP4L1A6NKN8 68 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 TSTD3H0UI37 97 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 KRTAP13-1Q8IUC0 172 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
PSEN1-209ENST00000553855 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
PSEN1-209ENST00000553855 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
PSEN1-209ENST00000553855 SOSTDC1Q6X4U4 206 aa4.98□□□□□ -1.61
PSEN1-209ENST00000553855 LITAFQ99732 161 aa4.98□□□□□ -1.61
PSEN1-209ENST00000553855 ZNF73O43830 326 aaPredicted RBP4.97□□□□□ -1.61
PSEN1-209ENST00000553855 IGLV6-57P01721 117 aa4.97□□□□□ -1.61
PSEN1-209ENST00000553855 SPRR1AP35321 89 aa4.97□□□□□ -1.61
PSEN1-209ENST00000553855 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
PSEN1-209ENST00000553855 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
PSEN1-209ENST00000553855 A6NDN8 102 aa4.96□□□□□ -1.62
PSEN1-209ENST00000553855 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
PSEN1-209ENST00000553855 PPDPFQ9H3Y8 114 aa4.96□□□□□ -1.62
PSEN1-209ENST00000553855 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
PSEN1-209ENST00000553855 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
PSEN1-209ENST00000553855 Q6ZRX8 168 aa4.95□□□□□ -1.62
PSEN1-209ENST00000553855 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
PSEN1-209ENST00000553855 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
PSEN1-209ENST00000553855 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
PSEN1-209ENST00000553855 A0A087X002 238 aa4.93□□□□□ -1.62
PSEN1-209ENST00000553855 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-209ENST00000553855 COX7BP24311 80 aa4.93□□□□□ -1.62
PSEN1-209ENST00000553855 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
PSEN1-209ENST00000553855 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
PSEN1-209ENST00000553855 COX8AP10176 69 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 CTAG1AP78358 180 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 VAMP3Q15836 100 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 SPATA45Q537H7 98 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 SLC25A34Q6PIV7 304 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
PSEN1-209ENST00000553855 TSPAN13O95857 204 aa4.91□□□□□ -1.62
PSEN1-209ENST00000553855 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
PSEN1-209ENST00000553855 NHP2Q9NX24 153 aaKnown RBP4.91□□□□□ -1.62
PSEN1-209ENST00000553855 A0A1B0GWB2 263 aa4.9□□□□□ -1.63
PSEN1-209ENST00000553855 DLEU1O43261 78 aa4.9□□□□□ -1.63
PSEN1-209ENST00000553855 SLC25A20O43772 301 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms