RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 Q5XG85 94 aa4.67□□□□□ -1.66
PRKCH-208ENST00000553846 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
PRKCH-208ENST00000553846 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
PRKCH-208ENST00000553846 RPS10P5Q9NQ39 176 aa4.67□□□□□ -1.66
PRKCH-208ENST00000553846 NEBP20929 6669 aa4.67□□□□□ -1.66
PRKCH-208ENST00000553846 ATP6V1G1O75348 118 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 MIR7-3HGQ8N6C7 128 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 C18orf32Q8TCD1 76 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 CHTOPQ9Y3Y2 248 aaKnown RBP4.66□□□□□ -1.66
PRKCH-208ENST00000553846 TRAPPC1Q9Y5R8 145 aa4.66□□□□□ -1.66
PRKCH-208ENST00000553846 LINC00614P0C842 121 aa4.65□□□□□ -1.67
PRKCH-208ENST00000553846 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
PRKCH-208ENST00000553846 HRCT1Q6UXD1 115 aa4.65□□□□□ -1.67
PRKCH-208ENST00000553846 COMMD7Q86VX2 200 aa4.65□□□□□ -1.67
PRKCH-208ENST00000553846 TRBV10-2A0A0K0K1G8 114 aa4.64□□□□□ -1.67
PRKCH-208ENST00000553846 C5orf52A6NGY3 159 aa4.64□□□□□ -1.67
PRKCH-208ENST00000553846 DDTP30046 118 aa4.64□□□□□ -1.67
PRKCH-208ENST00000553846 CD164Q04900 197 aa4.64□□□□□ -1.67
PRKCH-208ENST00000553846 RHEBQ15382 184 aa4.64□□□□□ -1.67
PRKCH-208ENST00000553846 TMEM223A0PJW6 202 aa4.63□□□□□ -1.67
PRKCH-208ENST00000553846 IFITM2Q01629 132 aa4.62□□□□□ -1.67
PRKCH-208ENST00000553846 H0Y8G0 127 aa4.61□□□□□ -1.67
PRKCH-208ENST00000553846 IFI27L1Q96BM0 104 aa4.61□□□□□ -1.67
PRKCH-208ENST00000553846 S100A12P80511 92 aa4.6□□□□□ -1.67
PRKCH-208ENST00000553846 C10orf91Q5T1B1 145 aa4.6□□□□□ -1.67
PRKCH-208ENST00000553846 Q6Q795 121 aa4.6□□□□□ -1.67
PRKCH-208ENST00000553846 SMIM29Q86T20 159 aa4.6□□□□□ -1.67
PRKCH-208ENST00000553846 SPANXB1Q9NS25 103 aaPredicted RBP4.6□□□□□ -1.67
PRKCH-208ENST00000553846 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
PRKCH-208ENST00000553846 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
PRKCH-208ENST00000553846 ZNF73O43830 326 aaPredicted RBP4.59□□□□□ -1.67
PRKCH-208ENST00000553846 HERV-K104P63124 156 aa4.59□□□□□ -1.67
PRKCH-208ENST00000553846 JOSD1Q15040 202 aaPredicted RBP4.59□□□□□ -1.67
PRKCH-208ENST00000553846 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
PRKCH-208ENST00000553846 MAP1LC3CQ9BXW4 147 aa4.59□□□□□ -1.67
PRKCH-208ENST00000553846 MYMXA0A1B0GTQ4 84 aa4.58□□□□□ -1.68
PRKCH-208ENST00000553846 H7C2G1 150 aa4.58□□□□□ -1.68
PRKCH-208ENST00000553846 APOC3P02656 99 aa4.58□□□□□ -1.68
PRKCH-208ENST00000553846 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
PRKCH-208ENST00000553846 LINC00587B1AMM8 73 aa4.57□□□□□ -1.68
PRKCH-208ENST00000553846 NDUFC2O95298 119 aa4.57□□□□□ -1.68
PRKCH-208ENST00000553846 TSPEAR-AS2P59090 65 aa4.57□□□□□ -1.68
PRKCH-208ENST00000553846 Q75L30 129 aa4.57□□□□□ -1.68
PRKCH-208ENST00000553846 CHCHD1Q96BP2 118 aaKnown RBP4.57□□□□□ -1.68
PRKCH-208ENST00000553846 HSBP1O75506 76 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 LINC00310P59036 64 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 Q1RN00 199 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 SLC25A34Q6PIV7 304 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 SOSTDC1Q6X4U4 206 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 MIEN1Q9BRT3 115 aa4.56□□□□□ -1.68
PRKCH-208ENST00000553846 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 SNAPINO95295 136 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 NPC2P61916 151 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 NDUFA5Q16718 116 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 S100A7L2Q5SY68 101 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 PRO1933Q9H354 126 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
PRKCH-208ENST00000553846 C20orf202A1L168 122 aa4.54□□□□□ -1.68
PRKCH-208ENST00000553846 LEPROTO15243 131 aa4.54□□□□□ -1.68
PRKCH-208ENST00000553846 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
PRKCH-208ENST00000553846 SVBPQ8N300 66 aa4.54□□□□□ -1.68
PRKCH-208ENST00000553846 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
PRKCH-208ENST00000553846 J3QQQ9 107 aa4.53□□□□□ -1.68
PRKCH-208ENST00000553846 LGALS3P17931 250 aaKnown RBP4.53□□□□□ -1.68
PRKCH-208ENST00000553846 LEPROTL1O95214 131 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 FABP4P15090 132 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 HERVK_113P61574 105 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 DHRS4-AS1Q9P1J3 65 aa4.52□□□□□ -1.69
PRKCH-208ENST00000553846 SERF1AO75920 110 aa4.51□□□□□ -1.69
PRKCH-208ENST00000553846 DPM2O94777 84 aa4.51□□□□□ -1.69
PRKCH-208ENST00000553846 PLNP26678 52 aa4.51□□□□□ -1.69
PRKCH-208ENST00000553846 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
PRKCH-208ENST00000553846 YPEL4Q96NS1 127 aa4.51□□□□□ -1.69
PRKCH-208ENST00000553846 IGLV5-48A0A075B6I7 105 aa4.5□□□□□ -1.69
PRKCH-208ENST00000553846 NMUP48645 174 aa4.5□□□□□ -1.69
PRKCH-208ENST00000553846 AKR1D1P51857 326 aa4.5□□□□□ -1.69
PRKCH-208ENST00000553846 ELOF1P60002 83 aaKnown RBP4.5□□□□□ -1.69
PRKCH-208ENST00000553846 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
PRKCH-208ENST00000553846 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
PRKCH-208ENST00000553846 IGKCP01834 107 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 TRGC2P03986 189 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
PRKCH-208ENST00000553846 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 OR13C6PQ8NH95 151 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 HSPB8Q9UJY1 196 aa4.49□□□□□ -1.69
PRKCH-208ENST00000553846 A0A0J9YXY3 114 aa4.48□□□□□ -1.69
PRKCH-208ENST00000553846 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
PRKCH-208ENST00000553846 C20orf166-AS1Q96NR2 134 aa4.48□□□□□ -1.69
PRKCH-208ENST00000553846 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
PRKCH-208ENST00000553846 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
PRKCH-208ENST00000553846 DEFB105AQ8NG35 78 aa4.46□□□□□ -1.7
PRKCH-208ENST00000553846 A8MUU9 505 aa4.45□□□□□ -1.7
PRKCH-208ENST00000553846 TCL1BO95988 128 aa4.45□□□□□ -1.7
PRKCH-208ENST00000553846 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms