RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 TRBV10-1A0A0K0K1A3 114 aa4.26□□□□□ -1.73
VIPAS39-205ENST00000553691 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
VIPAS39-205ENST00000553691 S100A7L2Q5SY68 101 aa4.26□□□□□ -1.73
VIPAS39-205ENST00000553691 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
VIPAS39-205ENST00000553691 FAM104AQ969W3 186 aa4.26□□□□□ -1.73
VIPAS39-205ENST00000553691 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 FAM236AA0A1B0GUQ0 79 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 FAM236BA0A1B0GV22 79 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 DNAL4O96015 105 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 COX7CP15954 63 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 NTM-AS1Q6ZSK4 140 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 DAZ4Q86SG3 579 aaKnown RBP4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 C5orf38Q86SI9 138 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 CHCHD7Q9BUK0 85 aa4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
VIPAS39-205ENST00000553691 J3KT08 172 aa4.24□□□□□ -1.73
VIPAS39-205ENST00000553691 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
VIPAS39-205ENST00000553691 CRYGAP11844 174 aa4.24□□□□□ -1.73
VIPAS39-205ENST00000553691 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
VIPAS39-205ENST00000553691 CLEC2BQ92478 149 aa4.24□□□□□ -1.73
VIPAS39-205ENST00000553691 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 CRPP02741 224 aa4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 RPL36AP83881 106 aaKnown RBP4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 ATP5EP2Q5VTU8 51 aa4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 OR13C6PQ8NH95 151 aa4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
VIPAS39-205ENST00000553691 H3BQ85 93 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 TMEM258P61165 79 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 Q6JHZ5 121 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 Q8N814 137 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 Q9HAA7 133 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
VIPAS39-205ENST00000553691 NDUFC2-KCTD14E9PQ53 114 aa4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 BCE1O60756 84 aa4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 C5orf47Q569G3 176 aa4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
VIPAS39-205ENST00000553691 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 UBE2L6O14933 153 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 HAMPP81172 84 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 LINC00242Q5T6M2 205 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 KRTAP26-1Q6PEX3 210 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 ENHOQ6UWT2 76 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 Q6ZSA8 131 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
VIPAS39-205ENST00000553691 OXTP01178 125 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 NPC2P61916 151 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 LINC01561Q8N1V8 128 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 CDC42SE2Q9NRR3 84 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 KLK12Q9UKR0 248 aa4.19□□□□□ -1.74
VIPAS39-205ENST00000553691 IGLV5-52A0A0A0MRZ9 124 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 hADV29S1A0JD25 119 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 LECT2O14960 151 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 NDUFC2O95298 119 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 TMEM243Q9BU79 118 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
VIPAS39-205ENST00000553691 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 PSCAO43653 123 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 COX6A2Q02221 97 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 ORMDL1Q9P0S3 153 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 LRP2P98164 4655 aa4.17□□□□□ -1.74
VIPAS39-205ENST00000553691 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 TMEM256-PLSCR3K7ERE1 68 aa4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 PDE6GP18545 87 aa4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 SMCR5Q8TEV8 140 aa4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 C2orf48Q96LS8 159 aa4.16□□□□□ -1.74
VIPAS39-205ENST00000553691 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 CCKP06307 115 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00158P58513 81 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 COX17Q14061 63 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 SOSTDC1Q6X4U4 206 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00167Q96N53 147 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 UBL5Q9BZL1 73 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 MUC2Q02817 5179 aa4.15□□□□□ -1.75
VIPAS39-205ENST00000553691 A0A087WZ39 114 aa4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 ANGP03950 147 aaKnown RBP4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 CLPSL2Q6UWE3 100 aa4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
VIPAS39-205ENST00000553691 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 USP17L23D6RBM5 183 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 SCXQ7RTU7 201 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms