RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LINC00587B1AMM8 73 aa7□□□□□ -1.29
PRPF39-204ENST00000553605 ANAPC16Q96DE5 110 aa7□□□□□ -1.29
PRPF39-204ENST00000553605 SMCO4Q9NRQ5 59 aa7□□□□□ -1.29
PRPF39-204ENST00000553605 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
PRPF39-204ENST00000553605 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
PRPF39-204ENST00000553605 NEBP20929 6669 aa6.99□□□□□ -1.29
PRPF39-204ENST00000553605 ZNF73O43830 326 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-204ENST00000553605 MT-ND4LP03901 98 aa6.98□□□□□ -1.29
PRPF39-204ENST00000553605 HERV-K104P63124 156 aa6.98□□□□□ -1.29
PRPF39-204ENST00000553605 BAGE3Q86Y29 109 aa6.98□□□□□ -1.29
PRPF39-204ENST00000553605 MAP1LC3CQ9BXW4 147 aa6.98□□□□□ -1.29
PRPF39-204ENST00000553605 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
PRPF39-204ENST00000553605 TMEM223A0PJW6 202 aa6.97□□□□□ -1.29
PRPF39-204ENST00000553605 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
PRPF39-204ENST00000553605 SPANXB1Q9NS25 103 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-204ENST00000553605 TRBV20-1A0A075B6N2 111 aa6.96□□□□□ -1.3
PRPF39-204ENST00000553605 KRTAP20-1Q3LI63 56 aa6.96□□□□□ -1.3
PRPF39-204ENST00000553605 C10orf91Q5T1B1 145 aa6.96□□□□□ -1.3
PRPF39-204ENST00000553605 Q75L30 129 aa6.96□□□□□ -1.3
PRPF39-204ENST00000553605 A0A096LNJ9 63 aa6.95□□□□□ -1.3
PRPF39-204ENST00000553605 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-204ENST00000553605 AKR1D1P51857 326 aa6.95□□□□□ -1.3
PRPF39-204ENST00000553605 Q1RN00 199 aa6.95□□□□□ -1.3
PRPF39-204ENST00000553605 HBDP02042 147 aa6.92□□□□□ -1.3
PRPF39-204ENST00000553605 A0A0G2JQZ4 141 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 NDUFC2O95298 119 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 TAL2Q16559 108 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 DHRS4-AS1Q9P1J3 65 aa6.91□□□□□ -1.3
PRPF39-204ENST00000553605 TCL1BO95988 128 aa6.9□□□□□ -1.3
PRPF39-204ENST00000553605 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
PRPF39-204ENST00000553605 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.3
PRPF39-204ENST00000553605 MIEN1Q9BRT3 115 aa6.9□□□□□ -1.3
PRPF39-204ENST00000553605 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
PRPF39-204ENST00000553605 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
PRPF39-204ENST00000553605 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
PRPF39-204ENST00000553605 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
PRPF39-204ENST00000553605 COMMD7Q86VX2 200 aa6.87□□□□□ -1.31
PRPF39-204ENST00000553605 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
PRPF39-204ENST00000553605 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
PRPF39-204ENST00000553605 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
PRPF39-204ENST00000553605 LINC00614P0C842 121 aa6.86□□□□□ -1.31
PRPF39-204ENST00000553605 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
PRPF39-204ENST00000553605 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
PRPF39-204ENST00000553605 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
PRPF39-204ENST00000553605 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
PRPF39-204ENST00000553605 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
PRPF39-204ENST00000553605 IFITM2Q01629 132 aa6.82□□□□□ -1.32
PRPF39-204ENST00000553605 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
PRPF39-204ENST00000553605 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
PRPF39-204ENST00000553605 SOSTDC1Q6X4U4 206 aa6.81□□□□□ -1.32
PRPF39-204ENST00000553605 Q96NJ1 140 aa6.81□□□□□ -1.32
PRPF39-204ENST00000553605 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
PRPF39-204ENST00000553605 NPC2P61916 151 aa6.8□□□□□ -1.32
PRPF39-204ENST00000553605 RHEBQ15382 184 aa6.8□□□□□ -1.32
PRPF39-204ENST00000553605 COX7BP24311 80 aa6.79□□□□□ -1.32
PRPF39-204ENST00000553605 ELOF1P60002 83 aaKnown RBP6.79□□□□□ -1.32
PRPF39-204ENST00000553605 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
PRPF39-204ENST00000553605 C18orf32Q8TCD1 76 aa6.79□□□□□ -1.32
PRPF39-204ENST00000553605 SEC11CQ9BY50 192 aa6.79□□□□□ -1.32
PRPF39-204ENST00000553605 COX19Q49B96 90 aa6.78□□□□□ -1.32
PRPF39-204ENST00000553605 LEPROTO15243 131 aa6.77□□□□□ -1.33
PRPF39-204ENST00000553605 S100PP25815 95 aa6.76□□□□□ -1.33
PRPF39-204ENST00000553605 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
PRPF39-204ENST00000553605 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
PRPF39-204ENST00000553605 IGLV5-48A0A075B6I7 105 aa6.75□□□□□ -1.33
PRPF39-204ENST00000553605 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
PRPF39-204ENST00000553605 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
PRPF39-204ENST00000553605 A8MUU9 505 aa6.74□□□□□ -1.33
PRPF39-204ENST00000553605 J3QQQ9 107 aa6.74□□□□□ -1.33
PRPF39-204ENST00000553605 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
PRPF39-204ENST00000553605 NMUP48645 174 aa6.73□□□□□ -1.33
PRPF39-204ENST00000553605 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
PRPF39-204ENST00000553605 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
PRPF39-204ENST00000553605 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
PRPF39-204ENST00000553605 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
PRPF39-204ENST00000553605 TRBV7-7A0A0K0K1E9 115 aa6.69□□□□□ -1.34
PRPF39-204ENST00000553605 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
PRPF39-204ENST00000553605 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
PRPF39-204ENST00000553605 HRES1P13985 223 aa6.68□□□□□ -1.34
PRPF39-204ENST00000553605 TRBV7-6A0A0J9YX20 115 aa6.67□□□□□ -1.34
PRPF39-204ENST00000553605 TRAPPC1Q9Y5R8 145 aa6.67□□□□□ -1.34
PRPF39-204ENST00000553605 F8WEM9 126 aa6.66□□□□□ -1.34
PRPF39-204ENST00000553605 H0Y8G0 127 aa6.66□□□□□ -1.34
PRPF39-204ENST00000553605 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
PRPF39-204ENST00000553605 LINC00308Q8TCZ7 52 aa6.66□□□□□ -1.34
PRPF39-204ENST00000553605 A0A1B0GWB2 263 aa6.65□□□□□ -1.34
PRPF39-204ENST00000553605 HERVK_113P61574 105 aa6.65□□□□□ -1.34
PRPF39-204ENST00000553605 Q6ZVH6 145 aa6.65□□□□□ -1.34
PRPF39-204ENST00000553605 LST1O00453 97 aa6.64□□□□□ -1.35
PRPF39-204ENST00000553605 GHRHP01286 108 aa6.64□□□□□ -1.35
PRPF39-204ENST00000553605 LINC00518Q8N0U6 118 aa6.63□□□□□ -1.35
PRPF39-204ENST00000553605 CHCHD1Q96BP2 118 aaKnown RBP6.63□□□□□ -1.35
PRPF39-204ENST00000553605 PLNP26678 52 aa6.62□□□□□ -1.35
PRPF39-204ENST00000553605 Q6JHZ5 121 aa6.62□□□□□ -1.35
PRPF39-204ENST00000553605 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
PRPF39-204ENST00000553605 A8MWP4 228 aa6.61□□□□□ -1.35
PRPF39-204ENST00000553605 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
PRPF39-204ENST00000553605 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms