RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
SYNE2-209ENST00000553308 MIEN1Q9BRT3 115 aa4.82□□□□□ -1.64
SYNE2-209ENST00000553308 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
SYNE2-209ENST00000553308 H7C2G1 150 aa4.81□□□□□ -1.64
SYNE2-209ENST00000553308 EIF4EBP3O60516 100 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-209ENST00000553308 NDUFC2O95298 119 aa4.81□□□□□ -1.64
SYNE2-209ENST00000553308 SOSTDC1Q6X4U4 206 aa4.81□□□□□ -1.64
SYNE2-209ENST00000553308 H0Y8G0 127 aa4.8□□□□□ -1.64
SYNE2-209ENST00000553308 LEPROTO15243 131 aa4.8□□□□□ -1.64
SYNE2-209ENST00000553308 NPC2P61916 151 aa4.8□□□□□ -1.64
SYNE2-209ENST00000553308 RHEBQ15382 184 aa4.8□□□□□ -1.64
SYNE2-209ENST00000553308 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-209ENST00000553308 J3QQQ9 107 aa4.79□□□□□ -1.64
SYNE2-209ENST00000553308 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
SYNE2-209ENST00000553308 COMMD7Q86VX2 200 aa4.79□□□□□ -1.64
SYNE2-209ENST00000553308 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
SYNE2-209ENST00000553308 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
SYNE2-209ENST00000553308 CD164Q04900 197 aa4.78□□□□□ -1.64
SYNE2-209ENST00000553308 Q1RN00 199 aa4.78□□□□□ -1.64
SYNE2-209ENST00000553308 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
SYNE2-209ENST00000553308 HINT1P49773 126 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-209ENST00000553308 IFITM2Q01629 132 aa4.77□□□□□ -1.65
SYNE2-209ENST00000553308 C10orf91Q5T1B1 145 aa4.77□□□□□ -1.65
SYNE2-209ENST00000553308 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
SYNE2-209ENST00000553308 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
SYNE2-209ENST00000553308 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
SYNE2-209ENST00000553308 NMUP48645 174 aa4.76□□□□□ -1.65
SYNE2-209ENST00000553308 Q5XG85 94 aa4.76□□□□□ -1.65
SYNE2-209ENST00000553308 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
SYNE2-209ENST00000553308 DHRS4-AS1Q9P1J3 65 aa4.76□□□□□ -1.65
SYNE2-209ENST00000553308 HSBP1O75506 76 aa4.75□□□□□ -1.65
SYNE2-209ENST00000553308 Q6Q795 121 aa4.75□□□□□ -1.65
SYNE2-209ENST00000553308 DEFB105AQ8NG35 78 aa4.75□□□□□ -1.65
SYNE2-209ENST00000553308 PMCHL2Q9BQD1 86 aa4.75□□□□□ -1.65
SYNE2-209ENST00000553308 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 PLNP26678 52 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 HERVK_113P61574 105 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 TAL2Q16559 108 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 OR13C6PQ8NH95 151 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 CBY1Q9Y3M2 126 aa4.74□□□□□ -1.65
SYNE2-209ENST00000553308 ELOF1P60002 83 aaKnown RBP4.73□□□□□ -1.65
SYNE2-209ENST00000553308 TEX49A0A1B0GTD5 131 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 DPM2O94777 84 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 LEPROTL1O95214 131 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 COX7BP24311 80 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 AKR1D1P51857 326 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 C6orf99Q4VX62 202 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
SYNE2-209ENST00000553308 IGKCP01834 107 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 CFC1P0CG37 223 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 LINC00310P59036 64 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 LITAFQ99732 161 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
SYNE2-209ENST00000553308 YPEL4Q96NS1 127 aa4.7□□□□□ -1.66
SYNE2-209ENST00000553308 SERF1AO75920 110 aa4.69□□□□□ -1.66
SYNE2-209ENST00000553308 APOC3P02656 99 aa4.69□□□□□ -1.66
SYNE2-209ENST00000553308 FABP4P15090 132 aa4.69□□□□□ -1.66
SYNE2-209ENST00000553308 USH2AO75445 5202 aa4.68□□□□□ -1.66
SYNE2-209ENST00000553308 IGLV5-48A0A075B6I7 105 aa4.68□□□□□ -1.66
SYNE2-209ENST00000553308 E9PLD3 99 aa4.68□□□□□ -1.66
SYNE2-209ENST00000553308 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
SYNE2-209ENST00000553308 SNAPINO95295 136 aa4.67□□□□□ -1.66
SYNE2-209ENST00000553308 TCL1BO95988 128 aa4.67□□□□□ -1.66
SYNE2-209ENST00000553308 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
SYNE2-209ENST00000553308 TIMM17BO60830 172 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 Q75L30 129 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 PCP2Q8IVA1 136 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 SVBPQ8N300 66 aa4.66□□□□□ -1.66
SYNE2-209ENST00000553308 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
SYNE2-209ENST00000553308 A0A1B0GWB2 263 aa4.65□□□□□ -1.67
SYNE2-209ENST00000553308 TRGC2P03986 189 aa4.65□□□□□ -1.67
SYNE2-209ENST00000553308 OBSCN-AS1Q96MR7 158 aa4.65□□□□□ -1.67
SYNE2-209ENST00000553308 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-209ENST00000553308 SMCPP49901 116 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-209ENST00000553308 LINC00518Q8N0U6 118 aa4.64□□□□□ -1.67
SYNE2-209ENST00000553308 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
SYNE2-209ENST00000553308 C20orf202A1L168 122 aa4.63□□□□□ -1.67
SYNE2-209ENST00000553308 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
SYNE2-209ENST00000553308 LCE2BO14633 110 aa4.63□□□□□ -1.67
SYNE2-209ENST00000553308 MT2AP02795 61 aa4.63□□□□□ -1.67
SYNE2-209ENST00000553308 NDUFA5Q16718 116 aa4.63□□□□□ -1.67
SYNE2-209ENST00000553308 MT1FP04733 61 aa4.61□□□□□ -1.67
SYNE2-209ENST00000553308 TRBV7-7A0A0K0K1E9 115 aa4.6□□□□□ -1.67
SYNE2-209ENST00000553308 A6NDN8 102 aa4.6□□□□□ -1.67
SYNE2-209ENST00000553308 F8WEM9 126 aa4.6□□□□□ -1.67
SYNE2-209ENST00000553308 SYS1-DBNDD2H3BUS1 97 aa4.59□□□□□ -1.67
SYNE2-209ENST00000553308 Q96NJ1 140 aa4.59□□□□□ -1.67
SYNE2-209ENST00000553308 TRBV20-1A0A075B6N2 111 aa4.58□□□□□ -1.68
SYNE2-209ENST00000553308 A4D1N5 150 aa4.58□□□□□ -1.68
SYNE2-209ENST00000553308 IGFL1Q6UW32 110 aa4.58□□□□□ -1.68
SYNE2-209ENST00000553308 CLEC2BQ92478 149 aa4.58□□□□□ -1.68
SYNE2-209ENST00000553308 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
SYNE2-209ENST00000553308 NHP2Q9NX24 153 aaKnown RBP4.58□□□□□ -1.68
SYNE2-209ENST00000553308 LINC01545Q5VT33 79 aa4.57□□□□□ -1.68
SYNE2-209ENST00000553308 Q6JHZ5 121 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms