RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.79
LETMD1-233ENST00000552433 ATRQ13535 2644 aa3.85□□□□□ -1.79
LETMD1-233ENST00000552433 IGKV3-15P01624 115 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 NREPQ16612 68 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 C4orf3Q8WVX3 66 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 R4GMQ9 66 aa3.84□□□□□ -1.79
LETMD1-233ENST00000552433 F8VRH5 84 aa3.83□□□□□ -1.8
LETMD1-233ENST00000552433 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
LETMD1-233ENST00000552433 ST20-AS1Q8NBB2 130 aa3.83□□□□□ -1.8
LETMD1-233ENST00000552433 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
LETMD1-233ENST00000552433 CSMD2Q7Z408 3487 aa3.83□□□□□ -1.8
LETMD1-233ENST00000552433 ACANP16112 2415 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 A0A096LNJ9 63 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 A0A0J9YX75 114 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 LCE6AA0A183 80 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 J3QRE1 110 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 STAB1Q9NY15 2570 aa3.82□□□□□ -1.8
LETMD1-233ENST00000552433 IGKV1-17P01599 117 aa3.81□□□□□ -1.8
LETMD1-233ENST00000552433 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
LETMD1-233ENST00000552433 PDE6HQ13956 83 aa3.81□□□□□ -1.8
LETMD1-233ENST00000552433 CR1P17927 2039 aa3.81□□□□□ -1.8
LETMD1-233ENST00000552433 PRRC2CQ9Y520 2896 aaKnown RBP3.8□□□□□ -1.8
LETMD1-233ENST00000552433 IGKV3-7A0A075B6H7 116 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 CISD3P0C7P0 127 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 FXYD6P3P58550 94 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 COX7B2Q8TF08 81 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 ABCA4P78363 2273 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 CACNA1CQ13936 2221 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 COL6A5A8TX70 2615 aa3.8□□□□□ -1.8
LETMD1-233ENST00000552433 MED12Q93074 2177 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 TRBV6-6A0A0A6YYG2 114 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 K7EMI3 77 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 M0R135 149 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 C9orf163Q8N9P6 203 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 TMEM14CQ9P0S9 112 aa3.79□□□□□ -1.8
LETMD1-233ENST00000552433 INTS1Q8N201 2190 aaKnown RBP3.79□□□□□ -1.8
LETMD1-233ENST00000552433 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 UQCR11O14957 56 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 COX6B1P14854 86 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 CCL3L1P16619 93 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 CCL18P55774 89 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 FDCSPQ8NFU4 85 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 LINC00208Q96KT6 92 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 TTTY12Q9BZ98 90 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 NSD1Q96L73 2696 aaPredicted RBP3.78□□□□□ -1.8
LETMD1-233ENST00000552433 CNTRLQ7Z7A1 2325 aa3.78□□□□□ -1.8
LETMD1-233ENST00000552433 JMJD7-PLA2G4BH0Y9G9 81 aa3.77□□□□□ -1.81
LETMD1-233ENST00000552433 M0R3E3 92 aa3.77□□□□□ -1.81
LETMD1-233ENST00000552433 MGPP08493 103 aa3.77□□□□□ -1.81
LETMD1-233ENST00000552433 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
LETMD1-233ENST00000552433 TACC2O95359 2948 aa3.76□□□□□ -1.81
LETMD1-233ENST00000552433 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
LETMD1-233ENST00000552433 NUP214P35658 2090 aaPredicted RBP3.76□□□□□ -1.81
LETMD1-233ENST00000552433 TRAV21A0A0B4J279 112 aa3.76□□□□□ -1.81
LETMD1-233ENST00000552433 LRCOL1A6NCL2 159 aa3.76□□□□□ -1.81
LETMD1-233ENST00000552433 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
LETMD1-233ENST00000552433 HIGD2AQ9BW72 106 aa3.76□□□□□ -1.81
LETMD1-233ENST00000552433 PSORS1C2Q9UIG4 136 aa3.76□□□□□ -1.81
LETMD1-233ENST00000552433 PRRC2AP48634 2157 aaKnown RBP3.76□□□□□ -1.81
LETMD1-233ENST00000552433 TRBV6-1A0A0K0K1D8 114 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 C10orf113Q5VZT2 155 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 HCP5Q6MZN7 132 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 U3KQA8 63 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 AKAP6Q13023 2319 aa3.75□□□□□ -1.81
LETMD1-233ENST00000552433 H0Y9P7 68 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 SPINK4O60575 86 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 DCHS2Q6V1P9 2916 aa3.74□□□□□ -1.81
LETMD1-233ENST00000552433 ZNF469Q96JG9 3925 aaPredicted RBP3.73□□□□□ -1.81
LETMD1-233ENST00000552433 TRAV40A0A0B4J280 105 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 I3L3M4 83 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 DEFB109BQ30KR1 87 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 PATE1Q8WXA2 126 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 ARHGAP32A7KAX9 2087 aa3.73□□□□□ -1.81
LETMD1-233ENST00000552433 TLN2Q9Y4G6 2542 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 PDE6GP18545 87 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 ZNF137PP52743 207 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 WFDC9Q8NEX5 89 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 TMEM167BQ9NRX6 74 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 DNAJC13O75165 2243 aa3.72□□□□□ -1.81
LETMD1-233ENST00000552433 ARFGEF3Q5TH69 2177 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 M0R1W7 72 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 PIN1P1O15428 100 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 DEFB133Q30KQ1 61 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 DEFB114Q30KQ6 69 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
LETMD1-233ENST00000552433 NOTCH1P46531 2555 aa3.7□□□□□ -1.82
LETMD1-233ENST00000552433 MAP1AP78559 2803 aaPredicted RBP3.7□□□□□ -1.82
LETMD1-233ENST00000552433 NDPQ00604 133 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms