RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 SPTBN1Q01082 2364 aaKnown RBP3.57□□□□□ -1.84
R3HDM2-214ENST00000552428 MMP24-AS1A0A0U1RRL7 71 aa3.56□□□□□ -1.84
R3HDM2-214ENST00000552428 P0C880 135 aa3.56□□□□□ -1.84
R3HDM2-214ENST00000552428 DEFB105AQ8NG35 78 aa3.56□□□□□ -1.84
R3HDM2-214ENST00000552428 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
R3HDM2-214ENST00000552428 LINC00472Q9H8W2 130 aa3.55□□□□□ -1.84
R3HDM2-214ENST00000552428 NOP10Q9NPE3 64 aaKnown RBP3.55□□□□□ -1.84
R3HDM2-214ENST00000552428 CACNA1BQ00975 2339 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 AHCTF1Q8WYP5 2266 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 A8MUU9 505 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 DNAH10OSP0CZ25 163 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 LYNX1P0DP58 116 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 DEFB116Q30KQ4 102 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 Q5W150 140 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 ANAPC11Q9NYG5 84 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 PRO0255Q9UI72 69 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 CENPFP49454 3210 aa3.54□□□□□ -1.84
R3HDM2-214ENST00000552428 GOLGB1Q14789 3259 aaKnown RBP3.53□□□□□ -1.84
R3HDM2-214ENST00000552428 KMT2BQ9UMN6 2715 aaPredicted RBP3.53□□□□□ -1.84
R3HDM2-214ENST00000552428 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.84
R3HDM2-214ENST00000552428 DEFB113Q30KQ7 82 aa3.53□□□□□ -1.84
R3HDM2-214ENST00000552428 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
R3HDM2-214ENST00000552428 CEP350Q5VT06 3117 aa3.51□□□□□ -1.85
R3HDM2-214ENST00000552428 RPL37AP61513 92 aaKnown RBP3.51□□□□□ -1.85
R3HDM2-214ENST00000552428 WNK1Q9H4A3 2382 aa3.5□□□□□ -1.85
R3HDM2-214ENST00000552428 LY6G6CO95867 125 aa3.5□□□□□ -1.85
R3HDM2-214ENST00000552428 LELP1Q5T871 98 aa3.5□□□□□ -1.85
R3HDM2-214ENST00000552428 CCL19Q99731 98 aa3.5□□□□□ -1.85
R3HDM2-214ENST00000552428 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
R3HDM2-214ENST00000552428 SPRR1BP22528 89 aa3.49□□□□□ -1.85
R3HDM2-214ENST00000552428 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
R3HDM2-214ENST00000552428 SDK1Q7Z5N4 2213 aa3.47□□□□□ -1.85
R3HDM2-214ENST00000552428 DEFB132Q7Z7B7 95 aa3.47□□□□□ -1.85
R3HDM2-214ENST00000552428 TMEM105Q8N8V8 129 aa3.47□□□□□ -1.85
R3HDM2-214ENST00000552428 C4orf3Q8WVX3 66 aa3.47□□□□□ -1.85
R3HDM2-214ENST00000552428 SPTBN2O15020 2390 aa3.47□□□□□ -1.85
R3HDM2-214ENST00000552428 LY6EQ16553 131 aa3.46□□□□□ -1.86
R3HDM2-214ENST00000552428 BRD3OSQ6XYD6 125 aa3.46□□□□□ -1.86
R3HDM2-214ENST00000552428 LINC00304Q8N9R0 145 aa3.46□□□□□ -1.86
R3HDM2-214ENST00000552428 CEP250Q9BV73 2442 aa3.46□□□□□ -1.86
R3HDM2-214ENST00000552428 PKDREJQ9NTG1 2253 aa3.46□□□□□ -1.86
R3HDM2-214ENST00000552428 DNAH12Q6ZR08 3092 aa3.45□□□□□ -1.86
R3HDM2-214ENST00000552428 A0A087WTM6 91 aa3.44□□□□□ -1.86
R3HDM2-214ENST00000552428 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
R3HDM2-214ENST00000552428 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
R3HDM2-214ENST00000552428 ALMS1Q8TCU4 4167 aa3.44□□□□□ -1.86
R3HDM2-214ENST00000552428 COL6A3P12111 3177 aa3.43□□□□□ -1.86
R3HDM2-214ENST00000552428 A0A1W2PNU3 283 aaPredicted RBP3.43□□□□□ -1.86
R3HDM2-214ENST00000552428 MAP1BP46821 2468 aaKnown RBP3.42□□□□□ -1.86
R3HDM2-214ENST00000552428 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
R3HDM2-214ENST00000552428 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
R3HDM2-214ENST00000552428 CUL9Q8IWT3 2517 aa3.41□□□□□ -1.86
R3HDM2-214ENST00000552428 UTRNP46939 3433 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 H3BNG1 76 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
R3HDM2-214ENST00000552428 TPRP12270 2363 aaKnown RBP3.38□□□□□ -1.87
R3HDM2-214ENST00000552428 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
R3HDM2-214ENST00000552428 Q96NJ1 140 aa3.38□□□□□ -1.87
R3HDM2-214ENST00000552428 APC2O95996 2303 aa3.37□□□□□ -1.87
R3HDM2-214ENST00000552428 DEFB136Q30KP8 78 aa3.37□□□□□ -1.87
R3HDM2-214ENST00000552428 RANBP2P49792 3224 aaKnown RBP3.36□□□□□ -1.87
R3HDM2-214ENST00000552428 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
R3HDM2-214ENST00000552428 MGAQ8IWI9 3026 aa3.36□□□□□ -1.87
R3HDM2-214ENST00000552428 PCNX1Q96RV3 2341 aa3.35□□□□□ -1.87
R3HDM2-214ENST00000552428 GPR179Q6PRD1 2367 aa3.35□□□□□ -1.87
R3HDM2-214ENST00000552428 ROS1P08922 2347 aa3.35□□□□□ -1.87
R3HDM2-214ENST00000552428 TNRC18O15417 2968 aaPredicted RBP3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 COL6A6A6NMZ7 2263 aa3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 NBDYA0A0U1RRE5 68 aa3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 A0A1B0GU33 70 aa3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 CNOT1A5YKK6 2376 aaKnown RBP3.34□□□□□ -1.87
R3HDM2-214ENST00000552428 RP1L1Q8IWN7 2480 aaPredicted RBP3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 A0A096LPF7 62 aa3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 H0YAA0 97 aa3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 C10orf99Q6UWK7 81 aa3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 PSORS1C2Q9UIG4 136 aa3.33□□□□□ -1.88
R3HDM2-214ENST00000552428 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
R3HDM2-214ENST00000552428 EP300Q09472 2414 aaPredicted RBP3.32□□□□□ -1.88
R3HDM2-214ENST00000552428 SZT2Q5T011 3432 aa3.32□□□□□ -1.88
R3HDM2-214ENST00000552428 UNC80Q8N2C7 3258 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 A0A1W2PNN7 141 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 LINC01556Q5JQF7 62 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 Q6ZSA8 131 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 NBEAQ8NFP9 2946 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 AKAP6Q13023 2319 aa3.31□□□□□ -1.88
R3HDM2-214ENST00000552428 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
R3HDM2-214ENST00000552428 EP400Q96L91 3159 aa3.29□□□□□ -1.88
R3HDM2-214ENST00000552428 VPS13AQ96RL7 3174 aa3.29□□□□□ -1.88
R3HDM2-214ENST00000552428 ATRXP46100 2492 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms