RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	RPL37AP8	A6NKH3	93 aa		4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	SNRPE	P62304	92 aa	Known RBP	4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	RPL24	P83731	157 aa	Known RBP	4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	ARL17A	Q8IVW1	177 aa		4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	LINC00167	Q96N53	147 aa		4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	GAGE10	A6NGK3	116 aa		4.03	□□□□□ -1.76
CNOT2-238	ENST00000552422	BOD1L2	Q8IYS8	172 aa		4.03	□□□□□ -1.76
CNOT2-238	ENST00000552422	ATOH7	Q8N100	152 aa		4.03	□□□□□ -1.76
CNOT2-238	ENST00000552422	DAND5	Q8N907	189 aa		4.03	□□□□□ -1.76
CNOT2-238	ENST00000552422	IGLV1-50	A0A075B6I6	118 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	IGKV2-28	A0A075B6P5	120 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	ZNF815P	A8K554	130 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	BCE1	O60756	84 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	IGKV2D-28	P01615	120 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	ADAMTSL4-AS1	Q5T5F5	129 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	REG3G	Q6UW15	175 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	DIRC1	Q969H9	104 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	LITAF	Q99732	161 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422	TTTY13	Q9BZ97	58 aa		4.02	□□□□□ -1.77
CNOT2-238	ENST00000552422		H0Y9J4	135 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	ZNF861P	O60384	105 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	TIMM17B	O60830	172 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	MT1HL1	P0DM35	61 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	SOSTDC1	Q6X4U4	206 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	SMIM29	Q86T20	159 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	KRTAP13-1	Q8IUC0	172 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	LINC01600	Q96MT4	127 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	MIEN1	Q9BRT3	115 aa		4.01	□□□□□ -1.77
CNOT2-238	ENST00000552422	TRBV10-2	A0A0K0K1G8	114 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	TMEM238	C9JI98	176 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422		M0R378	163 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	NCR3	O14931	201 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	NDUFC2	O95298	119 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	RPL28	P46779	137 aa	Known RBP	4	□□□□□ -1.77
CNOT2-238	ENST00000552422	PCP2	Q8IVA1	136 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	TMEM126A	Q9H061	195 aa		4	□□□□□ -1.77
CNOT2-238	ENST00000552422	SPANXB1	Q9NS25	103 aa	Predicted RBP	4	□□□□□ -1.77
CNOT2-238	ENST00000552422	KRTAP1-4	P0C5Y4	121 aa		3.99	□□□□□ -1.77
CNOT2-238	ENST00000552422	NPC2	P61916	151 aa		3.99	□□□□□ -1.77
CNOT2-238	ENST00000552422	SCGB1D4	Q6XE38	83 aa		3.99	□□□□□ -1.77
CNOT2-238	ENST00000552422	KCNQ1DN	Q9H478	68 aa		3.99	□□□□□ -1.77
CNOT2-238	ENST00000552422	TRBV10-3	A0A0K0K1G6	114 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	HSBP1L1	C9JCN9	74 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	SCGB1D1	O95968	90 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	PRLH	P81277	87 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	LINC00308	Q8TCZ7	52 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	SPANXD	Q9BXN6	97 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	SPANXC	Q9NY87	97 aa		3.98	□□□□□ -1.77
CNOT2-238	ENST00000552422	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	IGLV6-57	P01721	117 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	DDT	P30046	118 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	SPRR1A	P35321	89 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	UBE2A	P49459	152 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	FAM19A1	Q7Z5A9	133 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	PPDPF	Q9H3Y8	114 aa		3.97	□□□□□ -1.77
CNOT2-238	ENST00000552422	HMCN2	Q8NDA2	5059 aa		3.96	□□□□□ -1.77
CNOT2-238	ENST00000552422	KRTAP10-8	P60410	259 aa		3.96	□□□□□ -1.78
CNOT2-238	ENST00000552422		Q6ZVH6	145 aa		3.96	□□□□□ -1.78
CNOT2-238	ENST00000552422	LINC00518	Q8N0U6	118 aa		3.96	□□□□□ -1.78
CNOT2-238	ENST00000552422	LINC00337	Q8N6G1	96 aa		3.96	□□□□□ -1.78
CNOT2-238	ENST00000552422	IFITM1	P13164	125 aa		3.95	□□□□□ -1.78
CNOT2-238	ENST00000552422	S100A12	P80511	92 aa		3.95	□□□□□ -1.78
CNOT2-238	ENST00000552422	JOSD1	Q15040	202 aa	Predicted RBP	3.95	□□□□□ -1.78
CNOT2-238	ENST00000552422	S100A7L2	Q5SY68	101 aa		3.95	□□□□□ -1.78
CNOT2-238	ENST00000552422	COPS9	Q8WXC6	57 aa		3.95	□□□□□ -1.78
CNOT2-238	ENST00000552422	TRAV23DV6	A0A075B6W5	121 aa		3.94	□□□□□ -1.78
CNOT2-238	ENST00000552422	ETDC	A0A1B0GVM5	59 aa		3.94	□□□□□ -1.78
CNOT2-238	ENST00000552422	COX8A	P10176	69 aa		3.94	□□□□□ -1.78
CNOT2-238	ENST00000552422	PYY3	Q5JQD4	70 aa		3.94	□□□□□ -1.78
CNOT2-238	ENST00000552422		Q6ZRX8	168 aa		3.94	□□□□□ -1.78
CNOT2-238	ENST00000552422	ZNF73	O43830	326 aa	Predicted RBP	3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	SMIM6	P0DI80	62 aa		3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	RPL13A	P40429	203 aa	Known RBP	3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	SMCR5	Q8TEV8	140 aa		3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	VAMP8	Q9BV40	100 aa		3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	HIGD2A	Q9BW72	106 aa		3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422	CBY1	Q9Y3M2	126 aa		3.93	□□□□□ -1.78
CNOT2-238	ENST00000552422		A0A087X002	238 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	DLEU1	O43261	78 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	FAM229B	Q4G0N7	80 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	SPATA45	Q537H7	98 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	MUSTN1	Q8IVN3	82 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	OR13C6P	Q8NH95	151 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422		Q9BRP9	147 aa		3.92	□□□□□ -1.78
CNOT2-238	ENST00000552422	LRP2	P98164	4655 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	CRYGA	P11844	174 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	KRTAP10-5	P60370	271 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	C14orf144	Q96I85	54 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	SPRR4	Q96PI1	79 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	C12orf57	Q99622	126 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	ANAPC11	Q9NYG5	84 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	UBR4	Q5T4S7	5183 aa		3.91	□□□□□ -1.78
CNOT2-238	ENST00000552422	CFC1B	P0CG36	223 aa		3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	CFC1	P0CG37	223 aa		3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	KRTAP13-2	Q52LG2	175 aa		3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	SLC25A34	Q6PIV7	304 aa		3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	HIGD1B	Q9P298	99 aa		3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.9	□□□□□ -1.79
CNOT2-238	ENST00000552422	TRAV13-2	A0A0B4J235	113 aa		3.89	□□□□□ -1.79
CNOT2-238	ENST00000552422	TRBV7-6	A0A0J9YX20	115 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms