RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
PRPF40B-216ENST00000552301 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
PRPF40B-216ENST00000552301 OR13C6PQ8NH95 151 aa11.01□□□□□ -0.65
PRPF40B-216ENST00000552301 UBR4Q5T4S7 5183 aa11.01□□□□□ -0.65
PRPF40B-216ENST00000552301 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
PRPF40B-216ENST00000552301 Q6ZVH6 145 aa11□□□□□ -0.65
PRPF40B-216ENST00000552301 IFITM1P13164 125 aa10.99□□□□□ -0.65
PRPF40B-216ENST00000552301 LINC00518Q8N0U6 118 aa10.99□□□□□ -0.65
PRPF40B-216ENST00000552301 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-216ENST00000552301 KRTAP4-16G5E9R7 235 aaPredicted RBP10.98□□□□□ -0.65
PRPF40B-216ENST00000552301 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
PRPF40B-216ENST00000552301 A0A087X002 238 aa10.97□□□□□ -0.65
PRPF40B-216ENST00000552301 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
PRPF40B-216ENST00000552301 B5MCH6 92 aa10.96□□□□□ -0.65
PRPF40B-216ENST00000552301 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.65
PRPF40B-216ENST00000552301 TYMSOSQ8TAI1 123 aa10.96□□□□□ -0.65
PRPF40B-216ENST00000552301 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
PRPF40B-216ENST00000552301 SMCR5Q8TEV8 140 aa10.95□□□□□ -0.66
PRPF40B-216ENST00000552301 JOSD1Q15040 202 aaPredicted RBP10.94□□□□□ -0.66
PRPF40B-216ENST00000552301 Q6ZRX8 168 aa10.94□□□□□ -0.66
PRPF40B-216ENST00000552301 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
PRPF40B-216ENST00000552301 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
PRPF40B-216ENST00000552301 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
PRPF40B-216ENST00000552301 A6NDN8 102 aa10.89□□□□□ -0.67
PRPF40B-216ENST00000552301 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
PRPF40B-216ENST00000552301 Q9BRP9 147 aa10.88□□□□□ -0.67
PRPF40B-216ENST00000552301 TMA7Q9Y2S6 64 aaKnown RBP10.88□□□□□ -0.67
PRPF40B-216ENST00000552301 COX8AP10176 69 aa10.87□□□□□ -0.67
PRPF40B-216ENST00000552301 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
PRPF40B-216ENST00000552301 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
PRPF40B-216ENST00000552301 PAM16Q9Y3D7 125 aa10.87□□□□□ -0.67
PRPF40B-216ENST00000552301 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
PRPF40B-216ENST00000552301 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
PRPF40B-216ENST00000552301 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
PRPF40B-216ENST00000552301 SPATA45Q537H7 98 aa10.85□□□□□ -0.67
PRPF40B-216ENST00000552301 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
PRPF40B-216ENST00000552301 LINC00304Q8N9R0 145 aa10.84□□□□□ -0.67
PRPF40B-216ENST00000552301 DLEU1O43261 78 aa10.83□□□□□ -0.68
PRPF40B-216ENST00000552301 TSPAN13O95857 204 aa10.83□□□□□ -0.68
PRPF40B-216ENST00000552301 COX7BP24311 80 aa10.83□□□□□ -0.68
PRPF40B-216ENST00000552301 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
PRPF40B-216ENST00000552301 DHRS4-AS1Q9P1J3 65 aa10.83□□□□□ -0.68
PRPF40B-216ENST00000552301 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
PRPF40B-216ENST00000552301 C14orf144Q96I85 54 aa10.82□□□□□ -0.68
PRPF40B-216ENST00000552301 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-216ENST00000552301 A4D1N5 150 aa10.8□□□□□ -0.68
PRPF40B-216ENST00000552301 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
PRPF40B-216ENST00000552301 TRBV7-6A0A0J9YX20 115 aa10.78□□□□□ -0.68
PRPF40B-216ENST00000552301 A0A1B0GWB2 263 aa10.78□□□□□ -0.68
PRPF40B-216ENST00000552301 IGLV9-49A0A0B4J1Y8 123 aa10.76□□□□□ -0.69
PRPF40B-216ENST00000552301 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
PRPF40B-216ENST00000552301 ST20-AS1Q8NBB2 130 aa10.76□□□□□ -0.69
PRPF40B-216ENST00000552301 PRR4Q16378 134 aa10.75□□□□□ -0.69
PRPF40B-216ENST00000552301 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
PRPF40B-216ENST00000552301 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
PRPF40B-216ENST00000552301 MOBPQ13875 183 aa10.74□□□□□ -0.69
PRPF40B-216ENST00000552301 PYY3Q5JQD4 70 aa10.74□□□□□ -0.69
PRPF40B-216ENST00000552301 SPAG11AQ6PDA7 123 aa10.74□□□□□ -0.69
PRPF40B-216ENST00000552301 Q8NBF4 154 aa10.74□□□□□ -0.69
PRPF40B-216ENST00000552301 C12orf57Q99622 126 aa10.74□□□□□ -0.69
PRPF40B-216ENST00000552301 LRP2P98164 4655 aa10.73□□□□□ -0.69
PRPF40B-216ENST00000552301 VAMP3Q15836 100 aa10.72□□□□□ -0.69
PRPF40B-216ENST00000552301 C9orf153Q5TBE3 101 aa10.72□□□□□ -0.69
PRPF40B-216ENST00000552301 NHP2Q9NX24 153 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-216ENST00000552301 CTAG1AP78358 180 aa10.71□□□□□ -0.69
PRPF40B-216ENST00000552301 TAL2Q16559 108 aa10.7□□□□□ -0.7
PRPF40B-216ENST00000552301 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
PRPF40B-216ENST00000552301 SLC25A20O43772 301 aa10.69□□□□□ -0.7
PRPF40B-216ENST00000552301 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
PRPF40B-216ENST00000552301 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
PRPF40B-216ENST00000552301 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
PRPF40B-216ENST00000552301 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
PRPF40B-216ENST00000552301 SPRR1BP22528 89 aa10.67□□□□□ -0.7
PRPF40B-216ENST00000552301 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
PRPF40B-216ENST00000552301 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.7
PRPF40B-216ENST00000552301 A6NJY4 79 aa10.65□□□□□ -0.7
PRPF40B-216ENST00000552301 RETNLBQ9BQ08 111 aa10.65□□□□□ -0.7
PRPF40B-216ENST00000552301 H7C2G1 150 aa10.64□□□□□ -0.71
PRPF40B-216ENST00000552301 SPINK1P00995 79 aa10.64□□□□□ -0.71
PRPF40B-216ENST00000552301 CEND1Q8N111 149 aa10.64□□□□□ -0.71
PRPF40B-216ENST00000552301 A0A0B4J2C4 111 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 CFC1BP0CG36 223 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 CFC1P0CG37 223 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 Q1RN00 199 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 BVES-AS1Q5T3Y7 98 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 RNF213Q63HN8 5207 aa10.62□□□□□ -0.71
PRPF40B-216ENST00000552301 LINC00575Q6W349 94 aa10.61□□□□□ -0.71
PRPF40B-216ENST00000552301 IGLV5-48A0A075B6I7 105 aa10.6□□□□□ -0.71
PRPF40B-216ENST00000552301 UQCR10Q9UDW1 63 aa10.59□□□□□ -0.71
PRPF40B-216ENST00000552301 hADV29S1A0JD25 119 aa10.58□□□□□ -0.72
PRPF40B-216ENST00000552301 HSD52Q0P140 79 aa10.58□□□□□ -0.72
PRPF40B-216ENST00000552301 FXYD2P54710 66 aa10.57□□□□□ -0.72
PRPF40B-216ENST00000552301 RPS29P62273 56 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-216ENST00000552301 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
PRPF40B-216ENST00000552301 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
PRPF40B-216ENST00000552301 Q6ZQY7 126 aa10.55□□□□□ -0.72
PRPF40B-216ENST00000552301 PRO1854Q9UHT4 67 aa10.55□□□□□ -0.72
PRPF40B-216ENST00000552301 SNCGO76070 127 aa10.54□□□□□ -0.72
PRPF40B-216ENST00000552301 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
PRPF40B-216ENST00000552301 F8WEM9 126 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms